Sellimonas intestinalis: K5I26_13860
Help
Entry
K5I26_13860 CDS
T08070
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
sint
Sellimonas intestinalis
Pathway
sint03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sint00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
K5I26_13860
09124 Replication and repair
03420 Nucleotide excision repair
K5I26_13860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sint03021
]
K5I26_13860
03036 Chromosome and associated proteins [BR:
sint03036
]
K5I26_13860
03400 DNA repair and recombination proteins [BR:
sint03400
]
K5I26_13860
Enzymes [BR:
sint01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
K5I26_13860
Transcription machinery [BR:
sint03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
K5I26_13860
Chromosome and associated proteins [BR:
sint03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
K5I26_13860
DNA repair and recombination proteins [BR:
sint03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
K5I26_13860
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
Helicase_C
PhoH
Motif
Other DBs
NCBI-ProteinID:
UOX62255
LinkDB
All DBs
Position
complement(2866915..2869320)
Genome browser
AA seq
801 aa
AA seq
DB search
MEEKKEVQEIQEEVVRISVRNLVEFILREGDLDNRQGGTADREAMLLGGRIHRKIQRQMG
SGYHAEVPLQMMVPCEKLKIVVEGRADGIIEEKDRIAIDEIKGVLMDLEMVKEPKMVHLA
QAKCYACIYAKKRNLDEIGVQMTYCQMETEEVKRFYQTYGCTELEKWFLNLVHQYEKWAL
FQIEWRKKRNASIRRVEFPFPYREGQKDLVVSVYRSILRKKKLFIQAPTGVGKTIASVFP
AVKAVGEGLANQIFYLTAKTITRTVAEKAFLTLKEQGLSYKVITLTAKEKICFCEKTECN
PDACIYAKGHFDRVNDAVFDMLTHVDDMSRDQIEAYARKHTVCPFEMALDLSVWMDAVIC
DYNYVFDPNAHLKRFFGEGAKKEYLFLIDEAHNLVERGRSMYSASLCKEHLLEVRKIVKT
EDAKLTKALSGCNEQLLILKRECPGHALYSSVSHLVIRLMNVMSEVERFLEECRKEEIRE
QVLDLYFEIRDFLSIHEKLDENYMIYTELTEDGGFYVRLFCVNPAVNLSEYLNYGVCTVF
FSATLLPIQYYKKLLSTQTDDYAVYAHTPFPEENRRVMIGTDVTTRYTRRSDEMYRKYAG
YLLETVREKPGNYLAFFPSYRFLNDVYDAFQEMRKPEEDLFCLVQDPGMTEEEREEFLNY
FEEEREGTLLGFCVMGGIFSEGIDLTDEKLIGAWVIGTGLPQVCLERELLKQYFDEKGMS
GFDYAYLYPGMNKVLQAAGRVIRTDTDQGMIFLLDDRFQMSQYRAVFPREWSQVRRIRLS
QTAKEVAAFWEGTRTQPPVSD
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaaaaaagaagtacaagaaatacaggaagaagttgtccggatttcggtccga
aaccttgtagaatttatattaagagagggggatctggacaaccgacagggtggaaccgcg
gatcgggaggctatgctgcttggcgggcggattcaccgaaagattcaaaggcagatggga
agcggatatcatgcggaagtgcctttgcagatgatggtgccctgtgagaaattgaagatt
gtcgtggaggggcgggctgacgggattatcgaggagaaagacaggattgcgatcgatgag
atcaagggcgtcctgatggatctggaaatggtcaaagaacctaagatggtacatttggct
caggccaagtgttatgcatgtatttatgcaaagaaaaggaatcttgatgagatcggggta
cagatgacttactgtcagatggagacagaggaagtgaagcggttttaccagacgtatggc
tgtacagagctggagaaatggttcttgaaccttgttcatcagtatgagaagtgggcgctg
ttccagatcgaatggaggaagaagcgcaacgcctccattcgccgggtggagtttccattt
ccttatcgggaagggcagaaagatctggtggtgtcagtttaccgttccattttgagaaag
aaaaagctctttatccaggcgccgacaggagtagggaagaccattgcttctgtgtttccc
gcggtgaaagctgtcggggagggacttgccaatcagatcttctacctgactgcaaagaca
attacaaggacagtggcggagaaggcttttcttaccttgaaagagcaagggctctcctac
aaggtcattactctgacagcgaaggaaaagatctgtttctgtgagaagaccgagtgtaat
ccggatgcctgcatctacgccaaggggcattttgaccgggtcaacgatgcggtctttgac
atgctcacccatgttgatgatatgagccgggatcagatcgaggcatatgccagaaagcat
acggtctgtccttttgagatggcgctggatctctcggtttggatggatgcggtgatctgc
gattataactacgtcttcgatcctaacgcccatctgaagcggtttttcggggagggggcg
aagaaggaatatctgtttctgattgatgaagcccacaatcttgtggagagaggacgttcc
atgtacagtgcgtctctttgtaaggagcatctcctggaagtccgcaagattgtcaaaaca
gaggatgcgaaactgacaaaagcattatcgggttgtaatgagcagcttttgatactgaag
cgggagtgtccggggcatgcgctctattcgagcgtttcccatctggtgatccggctaatg
aatgtgatgagtgaggtggagcggtttttggaggagtgccggaaggaagaaatcagggag
caggtgctggatttgtattttgagatccgggattttctatccatccatgaaaagctggat
gagaattatatgatctacacggagcttacagaggatggggggttttatgtccggctgttc
tgtgtcaatccggcggtcaatctcagcgaatatctgaattatggggtatgcactgtcttt
ttttcggcgacactcctgcccatacagtattataagaagcttctgagcactcagacggat
gattatgctgtctacgcccacacaccatttccagaggaaaatcggcgggtaatgattggg
acggacgtgacgacccgttatacgaggcggagtgatgagatgtaccggaaatacgccggg
tatttgctggagacggtacgggaaaagccggggaattatctggcgttttttccatcctat
cgtttcttaaacgacgtctacgatgcatttcaggaaatgagaaagccggaagaggatctc
ttctgtctcgtccaggatccggggatgacagaagaagagcgggaagagtttctcaactat
ttcgaggaagagcgggaggggaccctgctcggattttgtgtgatgggagggattttctcg
gaagggattgatttgactgacgaaaaactgatcggtgcatgggttataggaacgggactt
ccacaggtttgtctggaacgggagctgttaaagcagtatttcgatgaaaagggaatgagc
gggttcgattatgcctatctgtatccggggatgaataaggtgctccaggcagccggccgg
gtgatcaggaccgatacggatcaggggatgatctttttgctggacgaccgttttcagatg
agccagtaccgggcagtgttcccaagggagtggagccaggtgaggaggattcggctttct
cagacagcgaaagaagtggctgcattctgggagggaaccagaacgcagccacccgtatca
gactaa
DBGET
integrated database retrieval system
