Sellimonas intestinalis: K5I26_14415
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Entry
K5I26_14415 CDS
T08070
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sint
Sellimonas intestinalis
Pathway
sint03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sint00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K5I26_14415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sint03400
]
K5I26_14415
Enzymes [BR:
sint01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
K5I26_14415
DNA repair and recombination proteins [BR:
sint03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K5I26_14415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
HHH_5
PIF1
nSTAND3
Helicase_RecD
UvrD-helicase
AAA_22
T2SSE
AAA_28
AAA
NTPase_1
NPHP3_N
AAA_29
UvrD_C
AAA_16
MeaB
TRI-like_N
RsgA_GTPase
SRP54
SLFN-g3_helicase
TrwB_AAD_bind
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
UOX62357
LinkDB
All DBs
Position
complement(2984776..2986986)
Genome browser
AA seq
736 aa
AA seq
DB search
MEKITGYIDHIIFRNEDNGYTVFQLNNEEGELTCVGKFSYIGEGEFLELEGEYTMHPSYG
MQLQVTNHRIKEPEDRESIERYLGSGAVKGIGPALAGKIVAKFGEDTFRIMEEEPERLAE
IKGISERKAREICVQVEEKKDLRQAMIYLQKYGISIHLAVKIYQKYGLGTYSVLEENPYK
LADDIEGVGFRTADEIASRIGIHTDSDFRIQSGIFYTLLQSVQEGHVYLEENVLSERAAQ
LLEVELKDIEKYLMDLAMAKKVVLKQDGEKVRVYPAQYYYMEMNTARMLKELNINYDEPD
DLIRRRIDKLEEETESTLDEQQKRAVAEAVKHGIFILTGGPGTGKTTTINAMIRYFLSEG
MDIRLAAPTGRAAKRMTETTGYEAQTIHRLLEVSGSPEESSKGGFGRNQDNPLETDVVII
DEMSMVDLALMHALLSSVVPGTRVIFVGDRNQLPSVGPGKVLQDLIESHAFPVMMLTRIF
RQAQESDIVVNAHRINAGEEVRLDNKSRDFFFLKRQDADVIISVILTLIQKKLPRYVKAK
MTDIQVLAPMKKGLLGVERLNRILQQYLNPPSVKKQEKEYGERLFRVGDKVMQTKNNYQL
EWEIATKYGLVVDKGVGVFNGDIGIVTAIHTYDETVEVEFDEKRKVKYPFKMLDELELAY
AITIHKSQGSEYPAVVIPLLAGPRQLYCRNLLYTAVTRAKKCVTLVGNETVFREMIQNVD
EQKRNTSLAERIQEIL
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaagattacaggatatatcgaccatatcatctttcggaatgaggataatggatat
acggtatttcaattaaataatgaagaaggagaactgacttgtgtcgggaagttttcctat
atcggcgagggtgagtttttggaactggaaggagaatacaccatgcatccgtcctatggg
atgcagcttcaggtgacaaatcacaggatcaaggagccggaggacagggaatccattgag
agatacctaggttccggagcagtcaaaggaatcgggcccgcgcttgcagggaaaatcgtc
gccaaattcggggaagatacgtttcgcattatggaagaagagccggagcggctggcggag
atcaaaggtatcagtgagagaaaggcaagagagatctgtgtgcaggtggaggagaaaaaa
gacctcagacaggccatgatatacttgcaaaaatacggaatttccattcatctggcggtt
aagatttaccagaaatacggacttggcacctacagtgttctggaggagaatccgtacaag
ctcgcggacgacattgagggtgtcggctttcggacagcggatgagatagcctcgcggatc
gggattcacactgattcggatttccgtattcagagtggcatcttttacacgttgctccaa
agtgtgcaggagggacatgtatacttggaagagaatgtactgtcagagagagcggcgcag
cttttggaggtggagctgaaagatattgagaaatatctgatggatcttgcgatggccaaa
aaggtggttctgaagcaggatggagaaaaggtgcgtgtctatccggcccaatattactat
atggaaatgaacacggcccggatgttaaaggagctgaatataaactatgacgaaccagat
gatctgatccgcagaaggattgacaagctggaggaagagacagaatctacattggatgaa
cagcagaaaagagcagtggcggaggcggtaaagcatgggatattcatcttgaccggagga
cctggtacaggaaagacaacgaccatcaatgcgatgatccgttattttctaagtgaggga
atggatatccgtctggcggctcctaccgggcgtgcggcaaagcggatgacagagacgacg
ggttatgaagcgcagacgattcatcggcttttagaagtaagcggcagtccggaggagagc
agcaaaggtggatttggaagaaatcaggacaatccgctggagacggatgtggtgattatt
gatgagatgtccatggtggatcttgcattgatgcacgcactgttgtcctcggttgttccg
gggacgagagtgatctttgtgggcgaccgcaaccagctcccgtcggtgggaccggggaag
gtccttcaggatctgattgagtcccatgcatttccggtgatgatgctgacccggattttc
cggcaggcacaggaaagtgatatcgtcgtcaatgctcaccggatcaatgcgggggaagaa
gtgcgtctggataataagagcagggatttctttttcctgaaacgccaggatgcggacgtc
attatcagtgtgattctgactctgatccagaaaaaactgccccgctatgtaaaggcgaag
atgacagatattcaggtgcttgctccaatgaagaaaggactgcttggagtggagcggctg
aaccggattttacaacaatatttaaacccgccttctgtcaaaaagcaggagaaggaatat
ggggaaagactgttccgtgtcggagataaggtcatgcagacgaaaaataattatcagctt
gagtgggagatcgcaacgaaatacggtctggttgtggacaagggcgtcggagtttttaat
ggagatattggtatcgtgacggcaatccatacatatgatgagactgtggaagtagagttt
gacgaaaaaagaaaggtaaaatatccgtttaagatgctcgatgaactggagcttgcttat
gcgataactattcataaatcacagggaagcgagtatccggcagtcgtcatcccgctgctt
gcgggaccgagacagctttattgtcgaaatttgctgtatacagcggttacaagagcgaaa
aaatgtgttacactggtaggaaacgaaactgtttttcgtgagatgattcaaaatgtggat
gagcagaagcggaatacgtcgcttgcagagcggattcaggagattttgtag
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