Sulfurovum indicum: IMZ28_01000
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Entry
IMZ28_01000 CDS
T07193
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sinu
Sulfurovum indicum
Pathway
sinu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sinu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IMZ28_01000 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sinu03019
]
IMZ28_01000 (recQ)
03400 DNA repair and recombination proteins [BR:
sinu03400
]
IMZ28_01000 (recQ)
Enzymes [BR:
sinu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IMZ28_01000 (recQ)
Messenger RNA biogenesis [BR:
sinu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IMZ28_01000 (recQ)
DNA repair and recombination proteins [BR:
sinu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IMZ28_01000 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HHH
Motif
Other DBs
NCBI-ProteinID:
QOR62094
UniProt:
A0A7M1S4H6
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All DBs
Position
185698..187488
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AA seq
596 aa
AA seq
DB search
MNKIETLEHYFGHSRFRPLQEEVIDAIMAKQDVLMILPTGGGKSLCYQLPTLMMKGVTVV
VSPLLALMHDQVVALRANGIPAVMLSSMQDMEESQMIEKQLRSGEVKFLYVAPERLTNGY
FLNLLHQLDINFFVIDEAHCVSEWGHEFRENYRRLSLLKEQFATIPIAAFTATATKMVEE
DIAANLGLKAPKRVRGSLFRENLTIQAKHRIKDGREQLLAFLKQHEGESGIIYTLSRKST
ESVAHFLQNQGLEARAYHAGLSTQEKNSTYQDFVADRVQIVVATIAFGMGIDKSNIRFVV
HMTMPKTLENYYQEIGRAGRDGLESETLLLFSASDIVQQKMFIEDLPETPYKEHAFNKLE
SMVRFANSENCRHQSVAAYFDDRINVCGDKCDNCSAPASQKVDITTAARKLLSAIARTDQ
KFGLHYVIDILRGSKEQRILQNGHDKLTVYGIGEEYSKSQWLTIGDKLLEIGALSIGEFK
VYKLTSFGVEVLKGEHHVSLKESRLSIQKAAPKRKVTYFDDYDVEVYDKLRDLRTRIASE
NGIPPYIIFSDKTLKDLSAKQPKSREEMLEVHGIGEVKFDRYGEAFLTLLAEKSTE
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaatagaaacactcgaacactactttgggcacagccgattcagaccacttcag
gaagaggtgatcgatgcaataatggcaaagcaggatgtactgatgattcttcctacagga
ggggggaagtcactctgctaccaactacccacactcatgatgaaaggggttacagtcgtg
gtctctccgcttttggcactcatgcatgaccaggtcgtagcactcagagccaatggtatt
cctgcagtgatgctctcctccatgcaggatatggaggagagtcaaatgatcgaaaaacag
cttagaagtggagaggtaaaatttctttatgtggcaccagagcgtttgacaaacggctat
tttctcaatcttctgcatcaacttgatatcaacttctttgtaatcgatgaagcccactgt
gtgagtgagtgggggcatgaattcagagaaaattatcgccgtctctctttgctcaaggag
cagtttgccacgataccgatcgctgcttttactgcaaccgcaacaaagatggtcgaagag
gatattgctgccaatcttggattgaaagctcccaaacgtgtcaggggttcacttttcaga
gagaatttgaccattcaggcaaaacaccgtatcaaagacggacgtgaacaactgttggct
tttttgaagcagcatgaaggtgaatcaggcatcatctacacgctttcaagaaagtcgaca
gagtcggttgcccactttctgcagaaccagggcctcgaagccagagcatatcatgcaggg
ctctctacccaggagaagaacagtacttaccaggattttgttgcagacagagtccagatc
gtagttgcgaccattgcgtttggtatggggatcgacaagagcaacattcgttttgtcgta
catatgacaatgccaaagacactggaaaattactaccaggagatcggccgtgcagggcgt
gacggtcttgagtcagagaccctgcttctcttttctgcatccgatatcgtacagcagaag
atgtttatagaggatcttcctgagacaccctataaagagcatgcattcaacaagcttgag
agtatggtacgctttgccaactcagagaattgccgtcaccagagcgtagcagcatatttt
gatgacaggataaatgtatgtggtgataaatgtgacaactgttcagcaccggcatcccaa
aaagttgacattactacagctgcacgaaaactgctctccgcgattgccagaaccgatcag
aaattcggtctgcactatgtgatcgatattctcagaggaagcaaggaacagcgtatttta
caaaatggtcatgacaagttgacagtttacggtattggggaagagtacagcaaatcccag
tggctgaccatcggtgacaaactgcttgagataggggcactgagtatcggagagtttaaa
gtctacaaactgacatcttttggagtagaggtacttaaaggagagcatcatgtctctctt
aaagagagtcggctcagtatccaaaaagcagcacccaaacgcaaggtgacctactttgat
gactatgacgtggaagtgtatgacaagctgagggatctgcgtacccgtatcgcttcggag
aatggcattcctccctatattatattttcagacaagacactgaaagacctcagtgccaaa
cagccaaaaagcagagaagagatgcttgaagtccatgggatcggtgaagtaaaatttgat
cggtacggggaagcgtttttgacactgcttgcagaaaaaagtacagaatag
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