Sulfurovum indicum: IMZ28_02455
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Entry
IMZ28_02455 CDS
T07193
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
sinu
Sulfurovum indicum
Pathway
sinu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sinu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IMZ28_02455 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sinu03021
]
IMZ28_02455 (rho)
03019 Messenger RNA biogenesis [BR:
sinu03019
]
IMZ28_02455 (rho)
Transcription machinery [BR:
sinu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
IMZ28_02455 (rho)
Messenger RNA biogenesis [BR:
sinu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
IMZ28_02455 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
Spore_III_AA
OB_RNB
AAA_25
AAA_22
FHA
ATPase_2
Mor
AAA
Motif
Other DBs
NCBI-ProteinID:
QOR62357
UniProt:
A0A7M1S4M0
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All DBs
Position
complement(476405..477727)
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AA seq
440 aa
AA seq
DB search
MSDSKKSNGHASKKNRTHVPVQGYKIEDLQQKPLDELVTIAKDVGVENPNEFQRKDLIFE
ILKSQVSQGGFILYTGILEIMNDGYGFLRSIDGNFANSSNDTYVSGTQVKRFALRNGDIV
TGQVRPPKDQEKYYALLKIEAINYLPPEKSKQRPLFDNLTPLYASEQLRMEYHPMKMTGR
VLDLFTPIGKGQRALIVAPPRTGKTELLKELAHGVTHNNPDASLMVLLVDERPEEVTDMQ
RSVKGEVYASTFDLPAQNHVRTAEMVIEKAKRRVEMGKDVIILLDSITRLARAYNTVTPS
SGKVLSGGVDANALHKPKRFFGAARNIEEGGSLTIIATALIETGSRMDEVIFEEFKGTGN
SEVVLSRHVAERRIYPAIDVTKSGTRKEELMVDPETLQKVWALRNAMQNMEEVEGLKFLY
SKMMKTKSNTEFLSMMNEGA
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacagcaaaaaatccaatggccatgccagtaaaaaaaacagaacacatgtaccg
gtccaagggtacaaaatagaagatctccaacaaaaaccccttgatgaacttgttactatc
gctaaagatgtcggtgtagagaaccctaacgaattccagcgaaaagacctcatttttgaa
attctgaagtctcaagtcagccaaggcgggttcatcctctatacaggtattctggaaatc
atgaatgacggttacggatttcttcgttctatcgacgggaattttgccaactccagcaat
gatacctacgtcagcggaacgcaggtaaaacgttttgccttgagaaacggagatatcgtt
accggacaggtacgtcctccaaaagatcaggaaaaatattatgctcttttaaagatcgaa
gcgatcaactatcttcctcctgaaaaatccaagcagcgtccgctctttgacaaccttaca
ccgctgtatgcttccgaacagcttagaatggagtaccatccgatgaaaatgaccggacgt
gtactcgaccttttcactcctattggaaaaggacaacgtgcacttatcgttgcgccgcca
agaacgggtaagacagagcttctcaaagaacttgcacacggagtaacccacaacaaccct
gatgcttctttgatggtactgcttgtcgatgaaagaccggaagaggtcaccgatatgcag
cgttcggtcaaaggtgaggtttacgcttcgacattcgaccttcccgcacaaaaccatgtg
cgtacagcggaaatggttattgaaaaggcaaaaaggcgtgtggagatgggcaaagatgtt
attattttacttgattccattaccagacttgcacgtgcatacaacacagtaacaccaagt
tcaggtaaagtactttccggtggggtcgatgccaatgcattgcataaaccaaaacgcttc
tttggtgcagccagaaatattgaagagggaggttcccttaccatcattgcaacagcactc
atagagacgggaagccgtatggacgaggtgatctttgaagagttcaagggtaccggtaac
tccgaagtggtactcagccgtcatgtagctgaacgccgtatatacccggccatagatgtg
acgaaatccggtacgcgtaaagaagagctcatggtcgatccggaaacacttcaaaaagtc
tgggcactcagaaatgccatgcagaacatggaagaggtagagggtctgaaattcctctac
tccaaaatgatgaagaccaaaagtaatacggaattcttgtcaatgatgaatgaaggtgcc
tga
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