KEGG   Sulfurovum indicum: IMZ28_07765
Entry
IMZ28_07765       CDS       T07193                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
sinu  Sulfurovum indicum
Pathway
sinu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sinu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    IMZ28_07765
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sinu03019]
    IMZ28_07765
Enzymes [BR:sinu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     IMZ28_07765
Messenger RNA biogenesis [BR:sinu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     IMZ28_07765
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 P-loop_SecA Utp25_C AAA_22 UvrD-helicase HI1480 Flavi_DEAD
Other DBs
NCBI-ProteinID: QOR61343
UniProt: A0A7M1S1L4
LinkDB
Position
1562738..1564021
AA seq 427 aa
MSFNTLGLSEPLLKAIKDQGYTIPTPIQKQALPVVIEGKDVLAAAQTGTGKTAAFTLPLL
ERLSQTHPKMGKKQIRVLVLTPTRELAAQVAQSIKNYGKYMKYSSTVIYGGVGINPQLAT
LRKGVDTVIATPGRLLDIAGQEGIDFSALETLILDEADRMLDMGFIHDIKKLMKMMPQRR
QTLLFSATFSPDIKKLASGLLKKPVLIEVAKENTTAEQVSQVVHFVDKSRKRELLSQLIK
TKNWRQVLVFTRTKHGANRLTKQLEESGITAAAIHGNKSQGARTKALASFKANDIRVLVA
TDIAARGIDIDQLPHVVNYELPNVPEDYVHRIGRTGRAGQSGEAVSLVCIDEHKLLFDIE
KFIKSKINKVQIEAFQPDPDIKAEPIQNGRGSGQKRRSENSRKRSGNNSSRNNKHKETKR
RAQKTTP
NT seq 1284 nt   +upstreamnt  +downstreamnt
atgtcattcaatacactggggctctcggaacctctactcaaagcgatcaaagatcagggc
tatacaatcccaacacccattcagaagcaggcactgcctgtagtcatcgaagggaaagat
gtacttgccgcagcacaaacaggtacaggaaaaactgctgctttcacactgcctttactg
gaaagactttcacaaacacacccgaaaatggggaaaaaacagatacgcgttctagtactc
acaccgacacgtgaacttgcagcacaggttgcgcagagcatcaaaaactacggtaagtat
atgaaatacagttcgactgttatttacggtggtgtaggaatcaatccgcaactggctact
ctcagaaaaggtgtggacactgtcatcgcaactccgggaagactgctggatatcgcagga
caagagggcatagacttctctgcattggagacactgatacttgatgaagcggacagaatg
ctggatatgggatttatacatgatataaaaaaactgatgaaaatgatgccgcagaggaga
cagacactgctcttttccgcaacattctccccagacatcaaaaagcttgcttccggactt
ttaaaaaagcctgtactgatagaagtagccaaagagaataccacggcagaacaggtcagc
caagtcgtacactttgtcgataagtcccgtaaaagagagctgctttcacaacttatcaaa
acaaaaaactggagacaggtactggtctttacccgtaccaaacacggtgcaaacagactg
acaaaacagcttgaagagagcggaatcaccgcggcagccattcatggcaacaaaagccag
ggggccaggaccaaagcgcttgccagtttcaaagccaacgatatccgtgtgcttgtagca
actgacatcgctgcaagaggtatagacatcgatcaactaccgcacgtggtcaattatgaa
ctgcccaacgtacctgaagattacgtacaccgtataggacgtaccgggcgtgccggacaa
agcggtgaagcggtctcactggtctgtattgatgaacataaactgctttttgatatcgag
aagttcattaaatcaaagatcaacaaggttcagatcgaagcttttcaaccagaccctgac
attaaagccgaacctattcagaacggtagaggcagtggacaaaaacgcagaagtgaaaat
tcacgaaagagatccgggaacaacagttcccgaaataataaacataaagaaaccaaaaga
agagctcagaaaaccactccctga

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