Shewanella inventionis: K8B83_02245
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Entry
K8B83_02245 CDS
T07895
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
sinv
Shewanella inventionis
Pathway
sinv00071
Fatty acid degradation
sinv00280
Valine, leucine and isoleucine degradation
sinv00310
Lysine degradation
sinv00362
Benzoate degradation
sinv00380
Tryptophan metabolism
sinv00410
beta-Alanine metabolism
sinv00640
Propanoate metabolism
sinv00650
Butanoate metabolism
sinv00907
Pinene, camphor and geraniol degradation
sinv00930
Caprolactam degradation
sinv01100
Metabolic pathways
sinv01110
Biosynthesis of secondary metabolites
sinv01120
Microbial metabolism in diverse environments
sinv01200
Carbon metabolism
sinv01212
Fatty acid metabolism
Module
sinv_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sinv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
K8B83_02245 (fadB)
00650 Butanoate metabolism
K8B83_02245 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
K8B83_02245 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
K8B83_02245 (fadB)
00310 Lysine degradation
K8B83_02245 (fadB)
00380 Tryptophan metabolism
K8B83_02245 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
K8B83_02245 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
K8B83_02245 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
K8B83_02245 (fadB)
00930 Caprolactam degradation
K8B83_02245 (fadB)
Enzymes [BR:
sinv01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
K8B83_02245 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
K8B83_02245 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
K8B83_02245 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
K8B83_02245 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
NAD_Gly3P_dh_N
Motif
Other DBs
NCBI-ProteinID:
UAL43735
LinkDB
All DBs
Position
complement(488151..490301)
Genome browser
AA seq
716 aa
AA seq
DB search
MIYQSPTIQVELLEDNIAKLCFNAPGSVNKFDRETLASLDAALDSIKQNTNIKALLLTSA
KSTFIVGADITEFLSLFQQDDATLLAWVEQANAVFNKLEDLPFPTASAVNGFALGGGCET
ILATDLRVADTNARVGLPETKLGIIPGFGGTVRLPRVIGADNALEWITTAKEQRPEEALK
VGAIDAVVAPEHLEAAAIQMLHDALNGNIDWQSRRTQKQSALQLPKLEAMMSFATAKGMV
FSVAGKHYPAPMTAVNVVEQAAGLDRDGALKVEAQAFIKLAKTDVAQALIGIFLNDQFVK
GKAKKASKLAKDVNQAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQPALELGLNEAAKIL
STQVARGRSTPEKMAKVLNNITPSLDYAAIKGSDIVVEAVVEHPKVKATVLAEVENFVSE
DAIIASNTSTISINLLAKSLKKPERFCGMHFFNPVHKMPLVEVIRGEHSSEETIASVVAY
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSGLLAEGADFAAVDKVMEKQFGWPMGPAYL
LDVVGLDTGHHAQAVMAEGFPDRMGKNGKDAIDIMFENKRLGQKNTKGFYAYSVDSRGKP
KKDIDPTSYELLSTEFGELKAFESDDIIARCMIPMIIETVRCLEEGIIASPAEGDMGLVY
GIGFPPFRGGVFRYLDTMGVANFVALADKYAHLGGLYQVTDAMRELAAKNGSYYQA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatctaccaaagccctaccattcaggttgagttacttgaagataatattgccaaactg
tgctttaacgcacctggttcggtaaacaagttcgacagagaaactctagcctcattagat
gctgcattagacagcataaaacaaaacactaacattaaagcgctattgctgacatcagcc
aaaagcacctttattgttggcgctgacattactgagtttttaagtctatttcagcaagat
gatgcaacgttactcgcttgggttgaacaagctaacgcggtatttaataagcttgaagac
ttgccatttcctacagcctctgcagtaaatggttttgcattgggtggcggttgtgaaacg
attttagccacagatttacgtgttgcagacaccaatgcacgcgttggtttaccagaaacc
aaactagggattattcctggctttggtggcacagttcgtttgccacgagttatcggagca
gacaatgcccttgagtggataaccaccgcaaaagagcaacgtccagaagaagcattaaaa
gtaggtgcaattgatgctgtcgtcgcgccagaacatttagaagcagcagcaattcaaatg
ctacacgacgcattaaatggcaacattgattggcaaagtcgtcgcactcaaaaacaatca
gcattacaactgccaaaacttgaagccatgatgtcttttgcaacagctaaaggcatggtg
ttttctgttgcaggtaaacattatccagccccaatgacggctgtgaatgttgttgaacaa
gctgctggattagaccgtgatggcgctctaaaagtagaagctcaagcgtttattaaactt
gcgaaaaccgatgttgcccaagcattaattggtatcttcttaaacgatcaatttgttaaa
ggtaaagccaaaaaagccagcaagctggccaaagatgtaaatcaagcagcagtattgggt
gcaggtattatgggtggcggtattgcttaccaaagcgccagtaaaggcacgccaattgtc
atgaaagacatcgctcaacctgcgttagaacttggcttaaatgaagccgctaaaattctt
tcaacacaagttgcccgcggccgctctaccccagaaaaaatggcaaaagtgcttaacaac
atcactccttcgcttgattatgccgccattaaaggtagcgacatagtagtagaagccgtt
gttgaacatcctaaagtgaaagcaaccgtattagctgaagttgaaaactttgtatctgaa
gatgccatcattgcttcaaatacatcaacaatttcaattaacttgctagcaaaaagcctt
aaaaagcctgaacgtttctgcggtatgcatttctttaaccctgtgcacaaaatgccatta
gttgaagttatccgtggtgagcacagctcagaagaaaccattgcttcagttgtggcctat
gcaagtaaaatgggcaaaaccccaatcgtggtaaacgactgccctggcttcttcgttaac
cgcgtgttattcccttactttgctggctttagtggtctactcgctgaaggtgcagatttt
gccgctgttgataaagtcatggaaaaacaatttggttggccaatgggccctgcatattta
cttgacgtagtcggtttagatacaggtcaccacgctcaagcggtaatggccgaaggtttc
cctgaccgcatgggtaaaaatggcaaagacgctattgatattatgtttgaaaacaaacgt
ctaggccaaaagaacaccaaaggtttctatgcttactcggttgacagtcgcggtaaaccg
aaaaaagatatcgatccaacaagctatgaattactcagcactgaatttggtgagttaaaa
gcattcgaatcagacgacatcatcgcgcgttgcatgatcccaatgatcatcgaaacggtt
cgttgtttagaagaaggtattattgcatctcctgctgaaggcgacatgggtctggtatac
ggcattggtttccctccattccgtggcggtgtattccgttatttagataccatgggcgtt
gcaaactttgttgcccttgcagacaaatatgcacacctaggcggcttataccaagtcacc
gatgcaatgcgtgaacttgcagccaaaaacggtagttactaccaagcctaa
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