Shewanella inventionis: K8B83_03775
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Entry
K8B83_03775 CDS
T07895
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sinv
Shewanella inventionis
Pathway
sinv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sinv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K8B83_03775 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sinv03019
]
K8B83_03775 (recQ)
03400 DNA repair and recombination proteins [BR:
sinv03400
]
K8B83_03775 (recQ)
Enzymes [BR:
sinv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K8B83_03775 (recQ)
Messenger RNA biogenesis [BR:
sinv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K8B83_03775 (recQ)
DNA repair and recombination proteins [BR:
sinv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K8B83_03775 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
DEAD
HRDC
RecQ_Zn_bind
ResIII
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
UAL43994
LinkDB
All DBs
Position
804944..806764
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AA seq
606 aa
AA seq
DB search
MPLDSLTSEQDILSARLQQVFGYRDFRQGQRDVIERSLQGQDTLVIMPTGGGKSMCYQLP
ALVLPGVTIVVSPLISLMKDQVDSLLQSGVSAAYLNSSLPREQSAEVLRKLHTGEIKLLY
VSPERLLRPDFMERLQSVDVSMFAVDEAHCISQWGHDFRPEYAALGQLKIQFPYIPLMAL
TATADHATRLSICERLNIVPYTLLSSFDRPNIRYTVAEKLNASNQLRQFVSAQNGASGIV
YCSSRRRVDEVADRLRLQGFNAQAYHAGMSQEDRADVQDKFLKDQVDIVVATVAFGMGIN
KSNVRFVVHYDIPKSIEAYYQETGRAGRDGLDAEAYMLFDPADIGRVRHLIEQSEPGPQQ
QVEFHKLHTMAAFAEAQTCRRQVLLHYFDEVASEPCGNCDICLDPPKRYDGTEDAQKVLS
CIYRLQQRFGIHHVIDVLRGSKAANVIDRGHDKLTTWGIGADKSTEHWLSVLRQLIHLGL
ASQDITRGSSIRLNPAARTILKAEMTLMLAEPRIQLLDVKRKSTTRAVQQYDRKLFARLK
LLRRELAEQHDIPPYLVFNDATLAEMSAMLPTSPGEMLAVNGVGQIKLDRFGGEFLDEIS
DYLTKG
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgccgcttgactccctaacctctgagcaggacatcttgtctgcaagattgcagcaggtg
tttggctatcgtgattttcgtcaagggcagcgagacgttattgagcgcagtttgcagggg
caagacaccttagtgattatgcctaccggtggcggtaagagtatgtgttaccagttgcct
gctttggtgttgccgggggtgactattgttgtgtcgccactgatatctttgatgaaagat
caggtcgacagtttattgcaaagtggtgtgtcggctgcatatcttaattcttcattgcct
cgcgaacaaagtgcagaggtgctgcgcaaactgcatacaggtgaaattaagctattgtac
gtatcgccagagcgattattgcgcccagattttatggagcgtttgcaatcggttgatgtg
tcaatgtttgcggtcgatgaagcgcattgtataagccaatggggccatgattttaggcct
gagtatgcagcgcttggacagttaaaaattcaatttccttatattccgttgatggcatta
accgcaacggcagatcacgccacccgcttaagtatttgtgagcgtcttaatattgtacct
tacacactgttgtcgagttttgaccgacctaatattcgttacactgtggcagaaaagctg
aatgcttcaaatcagttacgtcagtttgtcagtgcacaaaatggcgccagtggtattgta
tattgcagtagccgacgtcgtgtcgatgaggtggcagaccgcctgcgtttacaagggttt
aatgcccaggcttaccatgcaggtatgagccaggaagatcgtgcagacgtacaagataag
tttttaaaagatcaggttgatattgttgttgccacagtagcttttggcatggggattaac
aaatctaacgtccgttttgtggtgcattatgatatccctaaaagtatcgaagcctattac
caagaaaccggtcgtgcgggccgagatggcctagatgctgaagcgtatatgttgtttgac
cctgccgacattgggcgtgtaaggcacttaatagaacagtctgaaccggggcctcaacag
caggtggagtttcataaattacatactatggccgcctttgctgaagcgcaaacctgtcgg
cgacaagtattgctgcactattttgacgaagtggcatctgagccctgcggtaactgcgat
atctgtttagacccgcctaagcgatacgatggcactgaagatgctcaaaaagtgttgtcg
tgtatttaccgtttacagcaacgctttggtattcatcatgtgattgatgttcttcggggc
tctaaagccgcgaatgtgattgatcgcgggcatgacaaattaactacatggggtattggt
gctgacaagtcgacggaacactggttgagcgtgctgcgacagttaatccatctagggtta
gcaagtcaggatattactagaggctcaagtattaggttaaatcctgctgcaagaactatt
ctaaaagcggaaatgactttgatgttggctgagccgagaattcagttgcttgatgttaaa
cgcaaatcaacgactcgagcagtacaacaatatgatcgaaaattatttgctcgattaaaa
ttgctgcgccgggagttagcagagcagcatgatatcccgccgtatttggtgtttaacgat
gccacgcttgcagaaatgtctgccatgctcccaaccagccctggtgaaatgcttgccgtt
aacggggttgggcaaatcaaactggatagatttggcggtgagtttttagatgaaattagt
gactatcttacaaagggctag
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