Shewanella inventionis: K8B83_04130
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Entry
K8B83_04130 CDS
T07895
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sinv
Shewanella inventionis
Pathway
sinv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sinv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K8B83_04130 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sinv03400
]
K8B83_04130 (priA)
Enzymes [BR:
sinv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K8B83_04130 (priA)
DNA repair and recombination proteins [BR:
sinv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K8B83_04130 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
WHD_PriA
Zn_ribbon_PriA
AAA_30
TrwB_AAD_bind
AAA_16
Zn_ribbon_FGT1_1
AAA_22
AAA_19
Motif
Other DBs
NCBI-ProteinID:
UAL44049
LinkDB
All DBs
Position
complement(895194..897389)
Genome browser
AA seq
731 aa
AA seq
DB search
MPMFVEVALPVPLRQNFSYRVKDEQQTIVQVGLRVKVPFGRQQLIGLITAITDTCDLAPQ
QVKSVTALLDDAPILPESLYKLTLWAARYYFTSQGQMLSQALPVALRKGLDATPQAIVEY
HLTEQGRQAEPSVLNRAPAQKKLFELLLANPLTQDELTTQALSKSALKALQDKGWIEQKS
AHITHDLSWRHKLQMNESPHKLNKQQAVAVSVLTQQKGFHCTLLEGVTGSGKTEVYLTLL
ETILKQGKQALILVPEIGLTPQTINRFKRRFEVNVAVIHSGLTDNQRLEAWRQARVGEAA
IIIGTRSALFTPMAFPGLIILDEEHDSSFKQQEGVRYHARDLAVMRGHLEDVQVVLGSAT
PSLETLQNAISGRYHHLELSERAGVAQKVKQGTIDITSQPLKAGMSASLINEMRMHLDAG
NQVLLFLNRRGFAPALLCHECGHLHECDRCDAFFTVHQGLNEICCHHCGNQYAIPKQCHQ
CGSTMLMGHGLGTEQLEQELVKLFPQHPVVRIDRDTTRRKGSLEQQLQGIYMGKYKILVG
TQMLAKGHHFPDVTLVGLLDVDGALFSADFRAPERFGQLYTQVSGRAGRADKPGKVLLQT
HQSDNPILRDLLQRGYGEFARSQLSERQQALLPPAWHMVLIRAEAHLAQDADAFLAQISQ
LIPQDNELEVIGPIPAPLDRKAGKYRRQLMLQAKSRQQLQSVFEQVLSQMEQLPEAKRCR
WTIDRDPQDLM
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgccaatgtttgttgaagtcgccttacctgtgcccttacgccaaaattttagttaccgc
gtaaaagacgagcaacaaacaatagtgcaagtaggactgcgagtaaaagtaccttttggc
cgtcaacaactgattggtttaatcaccgccattaccgatacttgtgatttagcaccgcag
caagttaaatctgtcaccgctttgctagatgatgccccaatactgccagagtcgctatat
aaattaacgctttgggcggcacgatattattttacctcccaaggacaaatgctcagccaa
gcacttcctgtggcactgcgtaaaggattagatgcaacaccacaagccatagtggaatat
cacttaaccgaacaaggtcgccaggcagagccaagcgtacttaaccgagcgccagcccaa
aaaaaactctttgagttattgctagcaaatccgctaacccaagatgagctgaccactcaa
gccttaagtaaatcagcccttaaagcattacaagacaaaggctggatagaacaaaaaagt
gcgcacatcactcacgatttaagctggcgtcacaagctgcaaatgaacgagtcgccacac
aagttaaataaacagcaagctgtagcggtttctgtgctaacacaacaaaaagggtttcat
tgcaccttactagaaggcgttactggctcggggaaaaccgaagtctatttaaccttgctc
gaaaccattttaaaacaaggcaaacaggcactgattttggtgccagaaataggcttaacc
ccacaaaccataaatcgctttaaacgccgctttgaggtaaacgtcgcggtgattcattca
gggctcaccgacaatcaacgcctggaggcctggcgacaagctcgcgtgggcgaagcggcc
attattattggcacccgttcagcgctgttcaccccaatggcgtttcctggtcttatcatt
ttagatgaagaacacgacagtagctttaaacaacaagaaggggtgcgctaccatgcgcgc
gacttagccgttatgcgtggccatttagaagacgttcaagtggtacttggatcagcaaca
ccctcgcttgaaactctacaaaatgcgatatcgggccgttatcatcaccttgagttaagt
gaacgtgcgggggtggcacaaaaagtaaaacaaggcaccatcgatattacctcacagccc
ttaaaagccggcatgtcagcatcattaattaacgaaatgcgcatgcaccttgatgctggc
aaccaagtgttgttgtttttaaaccgtagaggatttgccccagccttgttgtgccacgaa
tgtggccatttacacgagtgcgatcgctgcgatgctttttttactgtgcatcaaggctta
aacgaaatttgctgtcatcactgcggcaatcaatatgctattcctaagcaatgccaccaa
tgcggaagcaccatgttaatggggcacggtttaggcacagaacagctcgagcaagagctg
gttaagctgtttccgcagcatccggttgtgcgtattgaccgcgacacaacgcgccgaaaa
ggctcccttgagcaacagttacaagggatttacatgggtaaatataaaattttggtgggt
actcaaatgctggccaaagggcatcattttcccgatgtaacattagtgggtttacttgat
gttgacggtgcattatttagtgccgattttcgtgcgcctgagcgatttggccagctctat
actcaagtatctggccgtgcagggcgggccgacaaacccggtaaagtgctactgcaaacc
caccaaagtgataaccctattttgcgcgacttgctgcaacgaggttatggcgaatttgcc
cgcagccagctgtctgaacgccaacaagcattattgccccccgcttggcacatggtgtta
attcgtgcagaggcgcatttagctcaagatgccgatgcctttttagcccaaataagccaa
ctcattcctcaggataacgagcttgaggttattgggcccattccagcgccattagaccgc
aaagccggaaaataccgccgccagttaatgctgcaagccaaaagtcgccaacaacttcag
agcgtctttgaacaggtccttagccaaatggaacaactcccagaagcgaaacgatgccgc
tggacgattgatcgcgacccacaagatttaatgtaa
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