Shewanella inventionis: K8B83_05320
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Entry
K8B83_05320 CDS
T07895
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sinv
Shewanella inventionis
Pathway
sinv03420
Nucleotide excision repair
sinv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sinv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K8B83_05320 (uvrD)
03430 Mismatch repair
K8B83_05320 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sinv03400
]
K8B83_05320 (uvrD)
Enzymes [BR:
sinv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K8B83_05320 (uvrD)
DNA repair and recombination proteins [BR:
sinv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K8B83_05320 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
K8B83_05320 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
UAL44268
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All DBs
Position
1172230..1174419
Genome browser
AA seq
729 aa
AA seq
DB search
MDVSSLLDGLNDKQREAVGAPLSNMLVLAGAGSGKTRVLTHRIAWLMQVEQQSPYSILAV
TFTNKAAAEMRERVEKVVGTNMGRMWIGTFHGLAHRLLRTHYQDANLPQTFQIIDSDDQL
RLLKRILKSLNLDEKQYPPRQAQGYINGKKDQGLRPKHIDAGGFPIEQNLLNIYKVYQES
CDRAGLVDFAEILLRAHELWLNKPHLLAHYQERFRHILVDEFQDTNAIQYAWIRVLAGNT
ANVMIVGDDDQSIYGWRGAQIENLHRFLQDFPGAQTIRLEQNYRSTANILNASNAVIANN
PDRLGKELWTEDKDGEPISVYCAFNEMDEAKFIVARISDWQDKGGNLSDCAILYRSNAQS
RVLEEAFLHKGLAYRIYGGLRFFERQEIKDAMGYMRLINNKDDDAAFERVVNTPARGIGD
RTLDIVRSTAKQHQLTLWQASVRLLEEKVLAGRAANAVRGFMELIVQLRTDTADMLLYRM
ADSVIERSGLRAMYEAEKGEKAQARIENLNELVTAARSFEMPEELEDMGELNAFLSHAAL
EAGEGQADAFTDAVQLMTLHSAKGLEFPMVFMAGVEEGLFPSKMALDEGDRLDEERRLCY
VGMTRAMQKLYISYAESRRIYGREDYASPSRFINEIPEKFVEQIRIRAQVAPSISQRFPA
RAVAVTATTKAHGFNDTGHKVGSKVKHFKFGEGVVTSFEGSGEKSRVQVNFVDFGSKWLL
VSLAKLERC
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggacgtatcatcattattagacggcctaaacgataagcaacgtgaggctgttggcgcg
cctctttcaaatatgttggtgttagcgggtgccggtagcggcaaaacccgagtgttaacc
catcgaattgcatggttaatgcaagttgagcaacaaagtccatattcaattttagctgta
acgtttaccaataaagcggcagcagaaatgcgtgagcgagttgaaaaggtcgttggcacc
aatatgggacggatgtggataggcaccttccatggtctcgctcaccgtttactgcgcacc
cattatcaagacgcaaatttgccgcaaaccttccagattattgattctgatgaccagtta
cgcttacttaaacgtattcttaagagccttaatttagatgagaagcaatatcctcctcgc
caggcccaaggctacattaacggtaaaaaagaccaaggattacgccctaagcatatagat
gcgggtgggtttcctattgagcaaaatttactgaatatttataaggtgtatcaagagtct
tgtgaccgagccggtttggtcgattttgctgaaattctattacgtgctcatgagctatgg
cttaataaaccgcatttgttagctcattatcaagagcgttttcggcatattctggtggat
gaatttcaagatactaacgcgattcagtatgcgtggatccgtgtattagcgggcaatacg
gccaacgtaatgattgtgggtgatgatgaccagtctatttacggatggcgcggcgcgcaa
attgaaaatttgcaccgttttttacaagacttcccgggtgcacaaaccattcgattagag
caaaactatcgctcaacagcgaatatattaaatgcgtcaaatgctgtaattgccaataac
cctgatcgtttaggtaaagaattatggaccgaagataaagatggcgaacccatttcggtt
tattgcgcctttaatgaaatggacgaagctaagtttattgttgctcggatcagtgactgg
caagacaaaggcggtaatttaagtgattgcgctattttgtaccgttcaaatgctcaatca
cgtgttttagaagaagcttttttacataaaggcttggcgtaccgtatatacggtggtttg
cgtttcttcgagcgccaagagattaaagatgcgatgggatacatgcgtctaatcaataac
aaagacgatgatgccgcttttgagcgggtggtgaatacacctgctcggggcattggtgat
cgtacattggatattgtgcgctcaacggccaaacaacatcagttaacgctatggcaagcc
agtgtgcgtttacttgaagaaaaagtattagctggccgtgccgctaatgccgttcgtggt
tttatggagctgattgtccaattgcgaacagataccgctgacatgttgttgtatcgtatg
gctgatagcgtgattgaacgctcaggtttacgcgcaatgtacgaggctgaaaaaggagag
aaagctcaggcgcgaattgaaaacttaaacgaattagttactgctgcgcgtagctttgaa
atgcctgaagagcttgaggatatgggcgagttaaatgcctttttatctcacgcggcatta
gaagcgggcgaaggtcaggcggatgcatttaccgatgctgtgcaactgatgacattacac
tcagcgaaagggcttgagtttccaatggtattcatggcgggtgttgaagaaggtttgttc
ccgagcaaaatggcgttagatgagggtgataggttagatgaagagcgtcgtttgtgctac
gtgggtatgactcgcgcaatgcaaaaattgtacatcagctatgccgagtctcgtcgtatt
tatggtcgtgaagactatgcgagtccatcacggtttattaatgaaatcccagaaaaattt
gttgagcaaatacgtattcgcgctcaggtggcgccatcaatcagtcaacgttttccagct
cgtgcagtggctgttaccgcgaccacaaaagcacacggttttaatgataccggccataaa
gtgggctctaaagtgaagcattttaagtttggtgaaggcgtggtgactagctttgaaggc
tcgggcgaaaaaagccgcgtgcaagttaattttgtggattttggcagtaaatggctattg
gtgtcactagccaaattagaacgttgttaa
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