Shewanella inventionis: K8B83_07595
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Entry
K8B83_07595 CDS
T07895
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sinv
Shewanella inventionis
Brite
KEGG Orthology (KO) [BR:
sinv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sinv03016
]
K8B83_07595 (truB)
Enzymes [BR:
sinv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
K8B83_07595 (truB)
Transfer RNA biogenesis [BR:
sinv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
K8B83_07595 (truB)
Prokaryotic type
K8B83_07595 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
UAL44675
LinkDB
All DBs
Position
1683264..1684211
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AA seq
315 aa
AA seq
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MARRPKGRFIDGIVLLDKDTGMSSNFALQKVKRIFNANKAGHTGALDPLATGMLPICLGE
ATKFSQHLLDADKRYLVTAKLGERTDTSDSDGEVVQTRPVNFTQALLDEKLELFRGTTQQ
IPSMYSALKYQGQPLYKYAREGIEVPRESRPITVFELNFIKLEGDELTLDIHCSKGTYIR
TIIDDLGEMLGCGAHVIMLRRTQVADYPYDKMVSLAELEALLAQAQEQDIAPKTLLDPLL
LPMDTAVANFPEINLPDTMLYYVMQGQAIQAPGLKPDCLVRITIGDERKFVGIGSMNDDG
LLAPKRLIVMHDTAQ
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcgcccaaaaggccgcttcattgacgggatcgtattactcgacaaagacact
ggcatgagttctaactttgctttacaaaaagttaagcgcatctttaatgccaataaagct
ggtcataccggtgcgctagacccattagctaccggaatgctaccgatttgcctaggcgag
gcgaccaagttttctcagcatttattagatgccgataaacgttacctcgtgacagcaaag
ctcggtgagcgtaccgataccagcgattcagacggtgaggttgtgcaaacccgtccagtg
aattttacccaagctctgcttgatgaaaaacttgagttatttcgtggaaccactcaacaa
attccgtcaatgtattctgcgctaaaataccaaggtcagcccttgtataaatatgcgcgt
gaagggattgaagtaccgcgtgaatcgcgtcctataacggtatttgagcttaattttatt
aagcttgagggtgacgaattaaccttagatattcactgttctaaaggtacttacattcgc
acaatcattgatgatctaggtgaaatgcttggctgcggtgctcatgtcattatgttacgc
cgcactcaggttgcagattatccttatgataaaatggtcagtttggcagagttagaagcg
ctgttagcccaggctcaagaacaagatatagcgccaaaaaccttactcgatcctttgtta
ttacctatggatactgccgttgctaatttccccgagattaatcttcctgacaccatgttg
tattatgtgatgcaagggcaggctattcaggctcctggattaaaaccagactgtttagtg
cgcattaccattggtgatgagcgtaagtttgtgggaattggcagcatgaatgatgatggt
ttgttagcgcccaaacgccttattgtgatgcatgacaccgctcagtaa
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