Shewanella inventionis: K8B83_08765
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Entry
K8B83_08765 CDS
T07895
Symbol
bamB
Name
(GenBank) outer membrane protein assembly factor BamB
KO
K17713
outer membrane protein assembly factor BamB
Organism
sinv
Shewanella inventionis
Brite
KEGG Orthology (KO) [BR:
sinv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sinv02000
]
K8B83_08765 (bamB)
Transporters [BR:
sinv02000
]
Other transporters
Pores ion channels [TC:
1
]
K8B83_08765 (bamB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PQQ_2
Beta-prop_ACSF4
PQQ
Beta-prop_EMC1_N
Beta-prop_WDR36-Utp21_1st
Beta-prop_FAM234A_B
DUF6906
Beta-prop_WDR75_2nd
Beta-prop_LRRK2
Motif
Other DBs
NCBI-ProteinID:
UAL44881
LinkDB
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Position
1949329..1950561
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AA seq
410 aa
AA seq
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MKSWCKNLLAVGLSVAFLSACSSSDVEEEPVSELVEIKATVFPEISWDTNVGEGVGDYYS
QLRPTVRYGKLFVADRSGVVVAFDEATGEELWSQNFNDVFEQKLKTKTKGMRLAAGVTAA
RNKVFVGGETGLLVALDEATGEVLWSSQANGELLSTPTVAEDVVAVNTAKGAFEGFNIDS
GEKLWTYESQLPNLTLRGTSSAAYEAGGFFVGTADGKVAVVVKNNGQAAWEQPVFTPSGG
NEFTRMADVDMTPLILGDNLYVASYNGNLVSMELRSGRIIWSRKYSSFNDLAEAGLSLYL
VDDRSRIYSVDRRNGLELWSNSTLKNRQLTAAAVIDNYLVVGDLEGYLHFIDRNNGDVVG
RIQVDSDGLFAQPLVVDDKIYVQGRSGKLASVTLSSEQANVEEDTDASAE
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcgtggtgtaaaaatctgcttgccgttgggctgagtgttgcttttttatctgct
tgctcttcaagtgatgttgaagaagagcctgtgagtgaattagttgaaattaaagcaacc
gtgtttccagagatcagctgggacactaatgtaggcgaaggcgtaggtgattattactcg
caacttcgtccaaccgtgcgttatggcaagttatttgttgcagatcgcagtggtgtggtt
gttgcgtttgatgaagcaacaggtgaagagttatggtcgcaaaactttaacgatgtattt
gagcaaaagcttaaaacaaaaaccaaaggcatgcgtttagctgctggagtgactgccgct
cgtaacaaagtttttgtaggtggcgaaactggattattggttgctttagatgaagcaacg
ggtgaagtactgtggtcatctcaagccaatggtgaattactgtctactcctactgttgcc
gaagatgttgttgctgtgaataccgctaaaggtgcttttgaaggctttaatattgatagc
ggtgaaaagctatggacatatgaaagccaactgcctaacttaacattgcgcggaacctcg
tcagccgcttatgaagcgggtggtttttttgtgggtaccgctgacggtaaagttgctgtt
gtggttaaaaacaatggccaagctgcgtgggaacaacctgttttcactccaagtggcggt
aatgagtttacccgtatggccgacgttgacatgacgccattaattttgggtgacaatctc
tatgtggcaagttacaacggtaatctagtgtcgatggagcttcgtagtggtcggataatt
tggtcgcgtaaatactcaagttttaacgatcttgccgaagcgggtttaagcttataccta
gtggatgaccgtagtcgcatctattctgtagaccgtcgtaatggtttagaactatggagt
aactcaacccttaaaaatcgtcaattgacagcggcagcagtgattgacaattatttagtg
gttggtgacttagaaggctatttacattttattgaccgtaataacggtgatgtagttggc
cgaattcaagtcgacagtgacggcttatttgctcagccattagtggttgatgataaaatc
tatgttcagggtcgaagcggtaaactggcttcagtcaccttaagcagtgagcaagcgaat
gttgaggaagatactgacgccagtgcggaataa
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