Shewanella inventionis: K8B83_10415
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Entry
K8B83_10415 CDS
T07895
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
sinv
Shewanella inventionis
Brite
KEGG Orthology (KO) [BR:
sinv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sinv01002
]
K8B83_10415
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sinv01011
]
K8B83_10415
Peptidases and inhibitors [BR:
sinv01002
]
Cysteine peptidases
Family C82
K8B83_10415
Peptidoglycan biosynthesis and degradation proteins [BR:
sinv01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
K8B83_10415
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
UAL45182
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All DBs
Position
2340974..2342395
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AA seq
473 aa
AA seq
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MLSQFTRPRQASVMGILLLCISSCVFADNTTQYDNLIQHLQLQYLAEPTAQRAQYLTILQ
TGSAAEQLEYIDIIQRSVASFWQQKQVPLAFDTLDENASVVAKNIALEPAVTDYLGVVNY
LRKLMWLAETQTWPTIAPEGLLRPGDVHPSIKQISQRLWLLGDANEYLADELVYQDTLAQ
SVKRFQSRHGLTSDAVIGPKTLFWLNQTPQQRATLLAKSFVEKTTYLSQLPQPYLLINIP
AFQMVLVDNDEVVLASKVIVGKPARQTPLMTGQISNVIINPTWTVPRQLLRHDILPQVKV
NGHYFKDRHFDVFDFDGNLVIKTPQQWQVEAAGRFPYRVVQRPGGDNALGRYKFHFNNDQ
SIYLHDTPTKSLFAKADRDLSSGCVRIEKVQQLADWFAKQLVIDKRTWHRLQKDYTTTQW
FALSGTLPVHMVYWRAWVDDAHIAQYRDDIYQLSPVAPANLLSQKMRPQAIVQ
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgctgagtcaatttacacgaccaagacaagcgagtgttatgggcattttattgctttgt
atatcctcatgcgtatttgcagacaacaccactcagtatgacaacctcattcaacattta
cagttgcaataccttgcagaacctacagcacagcgggcgcaatatttaaccatattgcag
actgggtcggcggccgaacaattggaatacattgatattattcagcgcagtgtcgcgtca
ttttggcaacaaaaacaggttccattagcatttgataccttagacgaaaatgcgtctgtg
gtcgcaaaaaatatcgcattagagcccgccgtcaccgattatcttggcgtggttaattat
ctacgaaaattaatgtggttagctgaaacacaaacatggccaaccattgctcctgaaggg
ttacttcgtcctggggatgtgcatcctagtattaaacaaatcagtcaacgtttatggctg
ctgggagatgcgaatgaatatcttgcagatgagttagtgtaccaagacactttagcccag
agcgtaaaacgttttcagtcacgacatggtttaacatcagatgctgttataggccctaaa
accttattttggctaaatcaaacaccccagcagcgtgcaacactgctcgcaaaaagtttt
gttgagaaaaccacttacctaagtcaattaccacaaccttatttattgattaatattccg
gcttttcaaatggtgttagttgataatgatgaagttgtgctggcgtcgaaagtcattgtg
ggtaaacccgctaggcaaacaccactcatgacaggtcaaatatctaatgtgatcatcaac
ccaacctggacagtaccacggcaacttttacgtcatgatattttgccgcaagttaaagta
aatggtcattactttaaagataggcattttgatgtgtttgattttgatggcaacttagtg
attaaaacgcctcagcaatggcaggtggaggccgctggtcgttttccttatcgtgtcgtg
cagcgtcccggcggcgataatgctttaggccgttataaatttcattttaataatgatcaa
agcatctatttgcatgatacaccaacaaaatcattgtttgcgaaggctgacagagatttg
tcatctggttgtgtgcgaattgaaaaagtacaacagttggccgactggtttgcgaagcaa
ttagtgattgataagcgtacctggcatcgtttacaaaaagattacacgaccactcaatgg
tttgcgttatcgggtacattaccggtacatatggtgtactggcgtgcctgggtagatgat
gcgcatattgctcagtatcgtgatgatatttaccaattaagcccagtggctcctgctaac
ttactaagccaaaaaatgcgcccacaggcgattgtgcaatag
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