Shewanella inventionis: K8B83_12565
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Entry
K8B83_12565 CDS
T07895
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sinv
Shewanella inventionis
Pathway
sinv00061
Fatty acid biosynthesis
sinv00071
Fatty acid degradation
sinv01100
Metabolic pathways
sinv01212
Fatty acid metabolism
sinv02024
Quorum sensing
sinv04146
Peroxisome
Module
sinv_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sinv00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
K8B83_12565
00071 Fatty acid degradation
K8B83_12565
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
K8B83_12565
09145 Cellular community - prokaryotes
02024 Quorum sensing
K8B83_12565
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sinv01004
]
K8B83_12565
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sinv04147
]
K8B83_12565
Enzymes [BR:
sinv01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
K8B83_12565
Lipid biosynthesis proteins [BR:
sinv01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
K8B83_12565
Exosome [BR:
sinv04147
]
Exosomal proteins
Exosomal proteins of breast milk
K8B83_12565
Exosomal proteins of breast cancer cells
K8B83_12565
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
UAL41736
LinkDB
All DBs
Position
2845556..2847220
Genome browser
AA seq
554 aa
AA seq
DB search
MERIWLEKSYPPGVEFEIDPDKYRSLAELFFKYTKQYASNTAFINMDVSITYQQLEQQAT
DFAAYLQHNLGLVKGDKFAIMIPNTLQYPIALFGALIAGLTVVNVNPLYTARELEHQLKD
SGAKGILILENFAHVLQQVINKTDVKHVITTGVGDRLGLIKGALVNGAIKHVKKLVPAFD
IPNAVKFNDAMAKGSKHTFTPVDINGEDLAFLQYTGGTTGPSKGAMLTHRNMVANLEQSN
AVTKNVYEVGKELIVTALPLYHIYALTSNCLAFLPFGGINLLITNPRDMPGFVKELAKYK
FTVITGVNTLFNGLLNTPGFDQLDFSALKMGFGGGMSVQRPVAEHWERVTKSRLLEGYGL
TECAPLVTMSPYNQKSYNGSIGLPASSTDVRLVGADGEDVALGEPGEMWVKGPQVMKGYY
NRQKATDEVLRDGWLATGDIATMDENGFFRIVDRKKDMIIVSGFNVFPNEIEEVIVAHEG
VLEAAAVGVSCDATGERVKVYIVRKDPNLTEQDIFDHCNKMLTNYKRPKIIEFMDELPKS
NVGKVLRKDLRSKA
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggaaaggatttggctagaaaagagttatccacctggggttgagtttgaaatagatccc
gataaataccgctctttagcagaattattttttaaatataccaaacaatacgcaagtaat
acggcattcattaacatggatgtgagtatcacttatcaacagcttgaacagcaagctact
gattttgcagcctacttacaacataatttagggttagtaaaaggcgataagtttgccatt
atgatccccaatactttgcaatatcctatcgctttatttggtgcactcatcgcagggcta
accgttgttaatgtcaatccattgtatacagcccgtgaactagaacatcaattaaaagac
tctggtgcaaagggcattctaattcttgaaaactttgctcatgtattgcagcaagttatc
aataaaacggatgtaaagcatgttattactactggtgtaggcgaccgcttagggcttatc
aaaggcgcgttagttaacggtgcaattaaacacgttaaaaagcttgtccctgcgtttgat
atcccaaatgcggttaaatttaatgatgccatggccaaaggcagcaaacacacttttaca
cctgtagacatcaatggtgaagatttggcttttttacaatataccggtggcaccacaggc
ccatcaaagggcgcaatgctaactcaccgcaatatggttgctaacctcgaacagtccaat
gctgtgaccaaaaatgtgtatgaagtcggcaaagaactcattgttactgcactaccgctt
taccatatttacgcattgacctctaattgcctggcctttttaccctttggcggcattaac
ttattaatcactaatccgcgtgatatgccaggctttgttaaagagttagccaagtataaa
tttaccgttattactggggtaaatacgctatttaatggtttgcttaatacgccagggttt
gatcaactcgattttagtgcattaaaaatgggttttggtggcggaatgtcagtacaacgc
cctgtagcagaacactgggagcgcgtgaccaaaagccgtttactggaaggttacggttta
acagaatgtgcgccactggtaaccatgagtccctataatcaaaaaagttacaatggctca
attggcttaccagcatcatcgacagacgttcgtttagtgggtgcagacggtgaagatgtg
gctttaggtgaaccaggtgaaatgtgggttaaaggccctcaggtgatgaaaggttattac
aatcgccaaaaagccaccgatgaagtattaagagacggttggctagccacgggcgatatt
gccaccatggatgaaaacggcttctttaggattgttgaccgtaaaaaagacatgattatt
gtgtctggttttaatgtattccctaatgaaatcgaagaagtgattgtggcacatgaaggc
gtacttgaagccgctgcggtgggtgtgtcttgtgatgcaaccggtgagcgggtaaaagtg
tacattgtgcgtaaagatcctaacctaaccgagcaagatatctttgaccattgcaacaaa
atgctcactaactataaacgccctaaaattattgaatttatggatgaattaccaaaaagt
aatgtgggcaaagtattgcgtaaagacttacgcagcaaggcatag
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