Shewanella inventionis: K8B83_13680
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Entry
K8B83_13680 CDS
T07895
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sinv
Shewanella inventionis
Pathway
sinv03030
DNA replication
sinv03430
Mismatch repair
sinv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sinv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K8B83_13680 (dnaQ)
03430 Mismatch repair
K8B83_13680 (dnaQ)
03440 Homologous recombination
K8B83_13680 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sinv03032
]
K8B83_13680 (dnaQ)
03400 DNA repair and recombination proteins [BR:
sinv03400
]
K8B83_13680 (dnaQ)
Enzymes [BR:
sinv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K8B83_13680 (dnaQ)
DNA replication proteins [BR:
sinv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K8B83_13680 (dnaQ)
DNA repair and recombination proteins [BR:
sinv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K8B83_13680 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
UAL41933
LinkDB
All DBs
Position
complement(3113339..3114067)
Genome browser
AA seq
242 aa
AA seq
DB search
MNIISSASRQVILDTETTGMNQAGGPVYIGHRIIEIGCVEVINRRLTGRTYHQYINPGQA
IDEEAIQVHGITNERVAHEPRFHQIAQDFIDFIDGAEIVAHNASFDVSFMDHEFSKLNPV
GPKTKDICSILDSLAIAKRLHPGQKNNLDALCKRYGIDNSRRTYHGALLDAEILADVYLI
MTGGQIKFNLSNEKAGQEAGGIKKIDTAAFNLKVVGATADELVLHEQRLDLIAKSGKCLW
RG
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgaacattatttcaagtgcgagtcgccaagttattctcgataccgaaacaacaggtatg
aatcaggctggtggtccagtttatataggccatagaattatagaaattggttgtgttgaa
gtgattaaccgccgattaacgggacgcacttaccatcagtatatcaatccgggccaagct
attgatgaagaagccattcaggtgcatggtattactaatgagcgtgttgcacatgaacct
aggtttcatcaaatcgctcaagatttcatagacttcattgatggtgctgaaattgttgca
cacaacgcaagcttcgacgttagctttatggatcatgagttttctaagctcaatcctgtc
gggcctaaaaccaaagatatttgctctattttagacagtttagccattgccaagcgcttg
catccagggcaaaaaaataaccttgatgctttgtgtaagcgttacggtatcgataatagt
cgtagaacctatcacggagcattgctagatgctgaaattctagctgatgtatacttaatt
atgacgggtggacaaattaagtttaatttgtctaatgaaaaggccggtcaagaagcgggt
gggataaaaaaaatcgacacagcagcgtttaatcttaaagtagttggggctacggccgat
gaattagtattacacgaacaacgacttgacctcattgccaagtctggaaaatgtctttgg
agagggtaa
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