Shewanella inventionis: K8B83_13700
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Entry
K8B83_13700 CDS
T07895
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
sinv
Shewanella inventionis
Brite
KEGG Orthology (KO) [BR:
sinv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sinv01011
]
K8B83_13700
Enzymes [BR:
sinv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
K8B83_13700
Peptidoglycan biosynthesis and degradation proteins [BR:
sinv01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
K8B83_13700
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM_RLK
HTH_28
Motif
Other DBs
NCBI-ProteinID:
UAL41937
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All DBs
Position
3116520..3118073
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AA seq
517 aa
AA seq
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MKVNLFIIAGTIVAVTGCQTLQTSTVQTDNEPTKVALKAKSKKSATVTLDEIEEQVAEVN
NLWLRISKQMSLPTVDNALVMQYKQWYLDNPKHLEIITQRASPFLYYIVEQLEERNLPIE
LALLPIVESGFDPLAYSSSHASGLWQLTPQTALSFGVKTNWWFDGRQDVASSTKAALDLL
QYLYPKMDNNWFYTIAAYNSGEGRLLNAIKRNKAKGKAADFWSLSLPKETAHYVPQLLAL
ADVIKHADKYGITLTPIENTPQIEVVNIESQLDINLAADLAQIDIVDLKAINPGLKRWAT
APQGPHQLIVPSDKAATFKRALATIEPESRINWVRYKIKSGDSISRIADQFETTETLIRS
SNGIKGNNIIAGKFLIIPVAIKDPDLATMTADQILARKAVVKSSPNKQTYTIKSGDSLWK
IAQSQQVSVAQLMKWNNLKQQSTLTVGKNLVIYPNEVTANTSGTEKTVNYRVKSGDSLAR
IATKYKVTVAELIEWNSLQNSKLIQPGQILKLIVTNS
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtaaatttattcattattgccggcaccatagtggcggtaactgggtgtcagaca
ctccaaacgtcaactgtccaaacagacaatgaaccaactaaagttgcactaaaggcaaaa
agcaaaaaatcggctaccgttacacttgatgaaatagaagagcaagtggcagaggtaaac
aatttgtggttgcggatcagcaaacaaatgtcattgcctacggtcgataatgctcttgtg
atgcaatacaagcaatggtatctggataatccaaagcatttagaaattatcacccaacgt
gcaagtccatttttatactatatcgttgaacaactcgaagaacgcaatctaccaatagaa
cttgccttgttacctattgtagaaagcggtttcgatcccttagcttattcgagtagccat
gcatcaggtttatggcaattaacaccgcaaaccgcgttgtcttttggtgtcaaaactaac
tggtggtttgatggccgacaagatgttgcatcatcaacgaaggcagctctagatttactc
caatacttataccctaaaatggacaataactggttttacacgattgcagcgtataattct
ggtgaaggccgcttactcaatgccattaaacgcaacaaggctaaaggcaaggccgccgat
ttttggtcgctatcattaccaaaagaaaccgctcattatgtgccgcaattacttgcactg
gcagatgtcattaagcatgccgataaatatggcataacattaacgccaattgaaaataca
ccgcaaattgaagtggttaatattgaaagtcagcttgatattaatttagccgctgatcta
gctcaaatcgacatcgtcgacttaaaagcgattaatccaggtttaaagcgttgggcaaca
gctccacaaggcccacatcagctaatcgtaccaagcgataaagcagcaacctttaaacgt
gcattagccactattgagccagaatcacgcattaactgggtacgctacaaaattaaatct
ggtgatagcattagccgtattgccgatcaatttgaaaccacagaaacacttattcgcagc
agtaacggcattaaaggcaacaatatcattgctggtaagttcttgattatccctgtggca
atcaaagatcctgatttagcaaccatgacagctgaccaaattctcgctcgaaaagccgtc
gtgaaatctagccctaacaagcagacttatacgattaaatctggtgattcgttatggaaa
attgcgcaatctcaacaagtctctgttgctcaattaatgaagtggaataaccttaagcaa
caatcaacattaactgtgggtaaaaatcttgttatttatcctaatgaagttaccgctaat
actagcggaacagagaaaaccgtaaactaccgcgttaaatctggtgattctctagcacgt
atcgcgacgaaatataaagtgaccgttgctgagttaattgaatggaacagtttacaaaat
agtaaattaattcaaccaggccaaatcttgaaattgattgtcacgaatagttag
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