Shewanella inventionis: K8B83_14865
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Entry
K8B83_14865 CDS
T07895
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sinv
Shewanella inventionis
Pathway
sinv03030
DNA replication
sinv03430
Mismatch repair
sinv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sinv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K8B83_14865
03430 Mismatch repair
K8B83_14865
03440 Homologous recombination
K8B83_14865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sinv03032
]
K8B83_14865
03400 DNA repair and recombination proteins [BR:
sinv03400
]
K8B83_14865
Enzymes [BR:
sinv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K8B83_14865
DNA replication proteins [BR:
sinv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K8B83_14865
DNA repair and recombination proteins [BR:
sinv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K8B83_14865
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
BRCT
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
UAL42156
LinkDB
All DBs
Position
3366732..3367628
Genome browser
AA seq
298 aa
AA seq
DB search
MNSEQKDFFAKYPYIPKKFIAIDVETTGLNAGVDKIIEVAAIKFDLLSNEHLVFEELINP
GFTVSSLITNITGITNAMLEGKESFLEIAQDLHEFIGDLPLVAYNAQFDKNFLFNEFSLA
NLELTNPFHCPMNLSKQAFTLPNYKLATVAKHCNVPLDGAHRAKADAIAAGRVFMCAATT
LGHINEISPKKLSAKSSGANHKDYPPNELGKHYGQTIVFTGELSISRAEAFEAAAKVGLA
IKSSVSKKTNYLIIGEQNENIVGASGISSKQIKAESLIDDGIDIQILDEDEFMTVAEE
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtgaacaaaaagatttttttgcaaagtacccttacatacccaaaaaatttatt
gcaattgatgttgaaacaacaggtttaaacgccggggttgataaaataatcgaagttgca
gcaatcaaatttgatctgttatcaaacgaacatcttgtttttgaagaattgattaaccca
ggttttactgtatctagccttatcaccaacattaccggcatcactaatgcaatgctcgaa
ggcaaagaaagtttcttagaaatagcccaagatctacatgagtttataggcgacttacct
cttgttgcatataacgctcaatttgataaaaactttttattcaatgaattctcattagct
aatcttgaactcaccaatcctttccattgccccatgaatctgtcaaaacaagcatttaca
ttaccaaattacaaattagctaccgtcgctaaacattgcaacgttccacttgatggagct
catagagcaaaggctgatgctattgcagctggccgtgtattcatgtgcgcggcaacgaca
cttggccatattaatgaaatttccccaaaaaagttatctgccaaatcatcaggagcaaat
cataaagactacccgccgaatgagcttggtaaacattacggtcaaaccatcgtctttact
ggcgaactatcaattagccgcgctgaggcatttgaagcggccgcaaaagttggactagca
attaaatcttccgtttcaaaaaaaactaactatttgatcattggtgaacagaatgaaaac
atagttggcgctagcggaatatcaagcaagcagataaaagccgaatcacttatcgatgac
ggtatagacattcaaattcttgatgaagatgaatttatgacggtagcagaagagtaa
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