Shewanella inventionis: K8B83_15775
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Entry
K8B83_15775 CDS
T07895
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
sinv
Shewanella inventionis
Pathway
sinv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sinv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K8B83_15775 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sinv03400
]
K8B83_15775 (recC)
Enzymes [BR:
sinv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
K8B83_15775 (recC)
DNA repair and recombination proteins [BR:
sinv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K8B83_15775 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
UAL42314
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Position
3555505..3559206
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AA seq
1233 aa
AA seq
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MLTLIQSNQMEVLSQQLAKLLAMSSDNKSILSGEHILVQSPGMSTWLRLEVAKHNGIAAA
LTFPLPSSFTWQLCHDLLPNVPKDNAFTKAAMTWKLMDLLPGLLDNSDLGPLKQYLTPQT
KSAENTQPNQENSQEYGQTLQANDTAHDAIKLFQLCGRIADIFDQYLVYRPEWILAWEQN
QALSQMDKPLELDQNQRWQPILWRALVEYNRNQLQASHYHRANLHADLLAALINPDTDLS
MLPERLYVFGISSMPPQTLDVLYHLASRIDVIILSLSPCQHYWGDIVEPKARARMALQYA
NKKQLEQGWEDKLEVGNPLLANNGQMGRELLDLMLSLPPEHTDFGYDCYVEPEPNNLLRG
VQYDILQMETLGQPLGPDADIYQDIDARRELSPNDDSITLRSCHSALREVETLHDHLLEL
LSNDASLHPKDIVVMMPDVAAYAPFIDAVFGTANSQYFTDKNPQKGDYYLPYAIADRGAA
QESPLINSFLNLLNINQSRFGLTEIISILEVPAILRRFELDDDELSLIRRWLDEANVRWG
RDEHTRSQLGVLPFTQNSWAFGIKRLILGYAFNDQADIYQGALTVQGIEGQSSQALGKLL
NFLETIDTYYSLFARDFSTRERLSQLQQLLADCYDTNDDEREQIQAIRDALVALETELDN
AGHQGKVNIEVLKQWFNQRLTESRVGQRYLAGSINFCTLMPMRSIPFKVVCLLGMNDGVY
PRVQHPVGFDLMAHFGPKKGDRSRRLDDRYLFLEALLSARQQLYISYIGHSERDNAERIP
SMLVSELVEYCQLSYLPSALKRQHEHTGNISAEDADKQVLQQLIQTQPLQPFDVKLFSTN
AQHNGHLQQSYNAQWCPPAKQGTFSMPFFNQPLPLSAEQADEVFAHAHIDIQGVKVVELE
LSSLIRFYRNPAQFFFNRSLKVDLSLDIQADDNDEPFSLNALERFVLQLSMVNNAIENKL
SVPDDALINRLKVSGELPMAPFDNVLLAQYQRDITPLINRVQFLQDDQPMHTVNIDLLFD
MKTQDSSSPLRVNLVGRIDDILPKGLVNYRPGTAHGRDFIRIYLRHLCLNAMAGQQTTQS
EHCAKHGYSYLLDIGHFHAFAPLTSEQATSQLLRFIECFIHGQRQPLCFMPKTAFAYVEA
EGDHQEKLLKAKAKWDDGQNQFGEGFDPHNQRLFQFPDDFNEATFGQLSHHLLQPMLSLY
TKDKLAELDTFVSKSAVEVLSQFIAKSHNVGAQ
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgcttaccttaattcaatcaaatcaaatggaagtgttatcgcagcagttagccaaactg
cttgcaatgagctcagataacaagagcatattaagtggtgagcatattctggtacaaagc
ccaggcatgtcgacttggctgcgattagaagtggctaaacacaacggtattgcagcggca
ctgacctttccattgccatcgagctttacttggcaattatgccatgacttactgcccaat
gtgcccaaagacaacgcctttacaaaagcagccatgacatggaaactcatggacttattg
ccaggcttgttagacaacagcgacttaggcccgttaaaacaatatttaacaccacaaaca
aaatctgccgaaaatacacaacccaaccaagaaaacagccaggaatacgggcaaacattg
caggctaatgacactgcccatgacgccataaagctgtttcaattgtgcggacgtattgcc
gacatttttgaccaatatttagtctatcgtcctgagtggatcctcgcctgggagcaaaac
caagcgttaagccaaatggataaaccgcttgaattagatcaaaaccagcgttggcagccc
atattgtggcgagcactggtggagtataatcgcaaccaactgcaagcaagtcattaccac
agggcaaatttacacgcagatctcctggctgcgctgataaacccagacacagacttatcc
atgttacctgagcgtttatatgtgtttggtatttcgtccatgccgccgcaaacccttgac
gtactttatcatttagcgtcgcgaattgacgtcatcatactgtcattaagcccttgtcag
cattattggggcgacatagttgaacccaaagcccgagcaagaatggctcttcaatacgcc
aataaaaaacagcttgaacaaggctgggaagacaagctcgaagtcggaaatccattgctg
gcaaacaatggccaaatgggccgtgaattgctggatttaatgttaagcctccccccagag
cacaccgactttggctatgactgttatgtagaacccgagccaaataatctcttacggggt
gtgcaatacgacatattgcaaatggaaactttaggccaacctttaggcccagatgccgat
atatatcaagatattgacgcacgccgagaactctcccctaatgatgattcaattacactg
cgcagttgtcatagcgcattaagagaagttgaaaccctacacgaccatttgcttgaactg
ttatcaaacgatgcgagcttacatcccaaagacattgtggtgatgatgccagatgtcgcc
gcttacgcaccgtttatcgatgccgtatttggtaccgccaacagccaatattttaccgat
aaaaacccgcaaaaaggtgactactatctgccctatgccatcgccgaccgaggcgcagca
caagagtcacccttaattaacagttttttaaatctactgaacataaaccaaagccgtttt
ggcctgactgaaataattagcatattagaagtgccagccattttgcgtcgttttgaactc
gatgatgacgaattgtcgcttattcgtcgctggctagacgaggctaacgtgcgctgggga
cgcgacgaacacactcgcagtcaattaggggtattaccctttactcaaaactcatgggct
tttggcattaaacggctcatattaggttatgcgtttaacgatcaagccgacatataccag
ggcgcgttaacggtacaagggattgaaggccaatcatctcaagcactcggtaaactgctt
aactttttagaaaccatagacacctactacagcttatttgctcgcgattttagtacacgc
gaacgcctaagccagttgcaacaattactggccgactgctacgacaccaatgatgacgaa
cgtgagcaaatacaggccattcgtgatgccttagttgcactggaaaccgaactcgacaat
gcgggccatcaaggcaaggtcaatattgaagtattaaaacaatggtttaatcaacggtta
accgaatcccgcgttggccaacgttatcttgctggtagcattaacttttgtaccttaatg
ccaatgcgttcaatcccgtttaaggtggtgtgcctactgggcatgaacgatggcgtatat
cctcgagtacaacaccctgtaggctttgacttaatggcccactttggccctaaaaaaggt
gaccgctctcgccgcctagacgaccgatatctgtttttagaagccttactgtctgctcgt
cagcaactgtatatcagctatattggccacagtgaacgcgacaatgctgagcggatccca
tcaatgctagtgtctgaattagtggaatattgccaactcagctacctaccatcggcacta
aaacgtcaacacgaacacactggcaacatcagtgccgaagacgctgacaaacaagtgttg
caacaactcattcaaacccagccattacagccgtttgatgtaaaattattcagtaccaat
gcccaacataacggtcatttacagcaaagttataatgcacagtggtgtccacccgctaag
caaggaacgtttagtatgccatttttcaatcagccattgcccttatcagcagaacaagct
gacgaagtgtttgctcatgctcatattgacatccaaggtgtcaaagttgttgaactagag
ctgtcatcactgatccgtttttaccgtaatccagcgcaattcttttttaatcgcagccta
aaagtagatttatcactagacattcaagcagatgacaatgacgaaccttttagtcttaat
gcccttgagcgctttgtattgcaattgtctatggtcaataacgccattgaaaataaactg
agcgtgccagacgatgcattaatcaacagattaaaggtcagtggcgagttacccatggcg
ccttttgataacgtgttgctcgcacaataccaacgcgacattacgccacttataaaccgt
gtgcagtttttacaagacgatcaacccatgcacacggtcaatatcgacttgttatttgac
atgaaaacccaagacagcagctcgccattacgggttaacctcgttggccgcattgatgat
attttacccaaaggattagtcaattatcgcccaggtacagcacacgggcgtgattttatt
cgcatctacttacgtcatttgtgcctaaatgccatggccgggcagcaaaccactcaatct
gaacattgcgccaaacacggttacagttacttactcgacattggtcattttcatgccttt
gctccactcacatcagaacaagcaacaagccaattattgcgctttatcgagtgttttatt
cacggtcaacgccagcccttatgttttatgcctaaaacggcctttgcttacgttgaagcc
gaaggtgatcaccaggaaaaactgcttaaagcgaaagccaaatgggatgatggccaaaat
caatttggtgaagggtttgacccgcacaatcaacgattatttcaatttcctgacgatttc
aacgaagccacctttggccaactcagtcatcacttattgcagcccatgttaagcctgtat
accaaagataagttggccgaattagacacttttgtcagtaaaagtgccgtagaggtatta
agccaatttattgcgaaatcgcacaatgttggagcacaataa
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