Shewanella inventionis: K8B83_18725
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Entry
K8B83_18725 CDS
T07895
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sinv
Shewanella inventionis
Brite
KEGG Orthology (KO) [BR:
sinv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sinv03400
]
K8B83_18725 (phrB)
Enzymes [BR:
sinv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
K8B83_18725 (phrB)
DNA repair and recombination proteins [BR:
sinv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
K8B83_18725 (phrB)
Prokaryotic type
K8B83_18725 (phrB)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Sulfotransfer_5
Motif
Other DBs
NCBI-ProteinID:
UAL42830
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All DBs
Position
complement(4217372..4218805)
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AA seq
477 aa
AA seq
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MINMNSLMWFRQDLRVADNPALVAACEFAKQHQGNVRALYIVTPQQWAQHDVAPIQIDFI
ERHVNLLAQSLAALGIALDVLHLHWFSDTHAALSDYLQQHNISAVFAGSEPEINERRRDA
LLIEQGVPLRLLEQDCVLAAGDVSNLSGDMYKVFTPFAKKWKSITCQRAILPVAAPAPVA
PALAQPEAIVFECNKRSSEQWAAGEGAAKRILDQFLASQVADYQNERDFPALEGTSRLSP
FLALGVISSRQCVAAVLTRYPEALVDDTSPAKTWLNELIWREFYRHLLVAFPRLSMAQNF
NELGDGIVWRNNLEEFQAWCEGRTGYPIVDAAMRQLNQTGWMHNRLRMVVASFLTKHLLV
DWRWGERYFRQQLIDGDLAANNGGWQWSAGTGCDAQPYFRVFNPMTQSSKFDPDASFIKR
YIPEIASWSIKDIHEPKSVNMHDLFAQPDNQGYPKPIVEHKMARLRAIEVLSALKRG
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgattaacatgaatagcttgatgtggtttagacaagatttgcgcgttgccgacaaccct
gcgttagtggcggcttgtgagtttgccaagcaacatcaaggcaatgtgagagccctatac
atagtgacgccacagcaatgggcgcagcatgatgttgcgcctattcagattgattttatt
gaacgtcatgtcaatttattagctcagtcgcttgcagcattaggcattgcattagacgtg
ctgcatttacattggtttagtgatacccatgcagcattgagtgattatttgcaacaacac
aacatcagtgcggtgtttgcaggaagtgagcccgaaataaatgaacgacgccgcgatgct
ctgttaatcgagcagggcgtaccactgagattactcgagcaagattgtgtgcttgcagcc
ggcgacgtgtcaaatttgtcgggtgacatgtacaaggtatttacaccatttgctaaaaaa
tggaaaagtatcacctgccaacgagccatattgccagttgccgcgccggcacccgttgcg
ccagcattagcacaacctgaggctattgtgtttgagtgcaataaacgcagtagtgagcaa
tgggctgcaggcgagggggctgccaagcgtattttagatcagtttttagccagtcaagtt
gccgactaccaaaacgaaagagatttccctgcgctggagggcaccagtcgtttatcgcct
tttttagctctgggtgttattagttcgcgccaatgtgttgcggctgttttaacgcgttac
cctgaagcattagttgacgataccagtccagctaaaacctggctcaacgagcttatttgg
cgagagttttatcgccatttgctggtggcgtttccacggttgtcgatggcacaaaacttt
aatgagttaggtgatggcattgtgtggcgcaataaccttgaggagtttcaagcctggtgc
gaaggccgaactggttacccgatagtcgacgccgcaatgcgtcagttaaatcaaaccggc
tggatgcataatcgtttacgcatggtggtggccagttttttaaccaagcatttgttggta
gattggcgttggggcgagcgctattttaggcaacaattgattgacggtgatttagccgct
aataatggcggctggcaatggtcggccggaaccggttgtgatgcgcagccttactttagg
gtgtttaaccccatgacccaaagtagcaagtttgaccccgatgccagctttattaaacgc
tacattcctgaaattgcctcctggtctattaaagatatccatgagcctaaatcggttaat
atgcacgacttatttgcccagccagataatcaagggtatcccaagccaattgttgaacac
aaaatggcacgcttaagagccattgaagtgctaagtgcattaaagcgcggttag
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