Shewanella inventionis: K8B83_19135
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Entry
K8B83_19135 CDS
T07895
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sinv
Shewanella inventionis
Pathway
sinv00061
Fatty acid biosynthesis
sinv00071
Fatty acid degradation
sinv01100
Metabolic pathways
sinv01212
Fatty acid metabolism
sinv02024
Quorum sensing
sinv04146
Peroxisome
Module
sinv_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sinv00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
K8B83_19135
00071 Fatty acid degradation
K8B83_19135
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
K8B83_19135
09145 Cellular community - prokaryotes
02024 Quorum sensing
K8B83_19135
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sinv01004
]
K8B83_19135
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sinv04147
]
K8B83_19135
Enzymes [BR:
sinv01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
K8B83_19135
Lipid biosynthesis proteins [BR:
sinv01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
K8B83_19135
Exosome [BR:
sinv04147
]
Exosomal proteins
Exosomal proteins of breast milk
K8B83_19135
Exosomal proteins of breast cancer cells
K8B83_19135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
UAL42906
LinkDB
All DBs
Position
4294617..4296215
Genome browser
AA seq
532 aa
AA seq
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MAYDADSTLDLQQYSSIVELIEKACHKFADNIAYSCLGKDTRFSEIEQDSRHFAAYLQHC
TQLQPGDRIALQLPNITQFVIAAYGIVRAGMVLVNTNPMYTERELTHQFNDSGAKALVVL
SDLLPTLTNVVNNTPVELVISTHAMDLIQPQPQPDTPFAKVTFLDVLIEGAKHPYLAVKP
THDDLIALQYTGGTTGLSKGAMLNHGNLLANSAQVKSRIASTMNQGHDIFVAPLPIYHIY
AFMVNLVLYFESGSCSVLIPNPRDIAGLINTMKRYPFTGFAGLNTLFVGLCHQPEFKALD
FSKMTITISGGTALTSAAANLWQQTTGCMISEGYGLSETSPVVSLNSPGHQRLGTIGKPV
LGTEVKVLDMDDNEVAIGQAGELAVRGPQVMQGYWNKPEETAKVMTKDGFFKTGDIGIAS
EDGYHTIVDRKKDMIIVSGFNVYPNEVEDVLSTHELVLECAVVGVEDERTGEAVKAVIVL
KSPSTDIEATKKVINDYCRSQLTAYKVPRIIEFTEQLPKSTVGKILRRELRK
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggcctatgatgcagattcaacacttgatttacagcagtattcatccatcgtcgaactc
atcgagaaagcttgtcacaagtttgctgataacattgcatattcatgcctaggaaaagac
accaggttcagtgaaattgaacaagactctcgtcattttgccgcttatctccagcattgc
acccagttgcaaccaggtgacagaattgcattgcaactacctaatattacacagtttgtc
attgccgcttatggtattgttcgcgcaggtatggtgttagtgaacacaaaccctatgtat
accgaacgagaattaactcatcaatttaacgactcaggcgcaaaagccttagtggtactg
tctgatctactacctacactcacaaatgtcgttaataacacccccgttgaactggtaatt
tcaactcatgcgatggatcttatccagccacaaccgcagccagatacaccgtttgccaaa
gtgacatttttagatgtgttaatcgagggtgcaaaacatccctacctggccgttaaacca
actcacgatgacttgatagcccttcaatataccggcggtacaacggggttatcgaaagga
gccatgctcaatcatggcaaccttttagccaattcagcccaagttaaatcacgcattgca
agcacaatgaatcaaggccacgacatatttgttgccccattaccgatttatcatatctat
gcgtttatggttaacttagtgctgtattttgagtcaggaagctgctcagtgttaattcct
aatccacgcgacatagcaggattaattaacaccatgaaacgctacccttttactggtttc
gctggtttaaataccttgtttgtcggcttgtgccatcaaccagaatttaaagcactagat
ttcagtaaaatgaccattaccatttcaggcggcacggctttaaccagcgctgcagccaac
ctgtggcaacaaactacaggatgcatgatttcagaaggatatggtttatcagaaacatcc
cccgtcgttagtttaaactcacctgggcatcaacgacttggtacgataggaaaaccggtt
ttaggtacagaagttaaggtacttgatatggacgataacgaagtggcaattggccaagct
ggcgaactggcggttcgtggtccacaagtcatgcaaggctactggaacaaacctgaagaa
actgccaaagtgatgacaaaagacggcttctttaaaacgggtgatatcgggatcgcaagc
gaagatggttatcacaccattgtcgatcgcaaaaaagacatgattattgtgtcaggtttt
aatgtgtatcctaacgaagtggaagacgtactatcaacacatgagttagtgctcgaatgt
gcggtggtaggcgttgaagatgaacgaaccggcgaagccgtaaaagccgttatcgtgtta
aaatctccttcaacagacatagaggcaactaaaaaagtcatcaatgattattgccgcagc
caactcaccgcttacaaggttccaaggattattgagtttactgagcaactccccaaaagt
accgtagggaagatattacgtagagagctgcgcaaataa
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