KEGG   Streptococcus iniae ISNO: DW64_03635
Entry
DW64_03635        CDS       T03286                                 
Name
(GenBank) single-stranded DNA exonuclease
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sio  Streptococcus iniae ISNO
Pathway
sio03410  Base excision repair
sio03430  Mismatch repair
sio03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sio00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    DW64_03635
   03430 Mismatch repair
    DW64_03635
   03440 Homologous recombination
    DW64_03635
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sio03400]
    DW64_03635
DNA repair and recombination proteins [BR:sio03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     DW64_03635
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     DW64_03635
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      DW64_03635
SSDB
Motif
Pfam: ssDNA-exonuc_C RecJ_OB DHH DHHA1 DUF7330 DsrE
Other DBs
NCBI-ProteinID: AHY17435
UniProt: A0A3L8GLQ6
LinkDB
Position
735373..737574
AA seq 733 aa
MIRSKYKWKIQEEEPDAGFFKLAKAQGLTKEAAEIVFERGIKDENSLSQFLKADLSSLHN
PYLLYQMDKAVGRIRQAIENAETILVYGDYDADGMTAASIMKETLEMMGSEPLVYLPNRF
TDGYGPNKSVYKYFMDQEAVSLIITVDNGVAGHEAIDYAQENGVDVIVTDHHHLPDDLPN
AYAIIHPEHPEGQYPFQKLAGCGVAFKLATALLESIPTEFLDLVAIGTIADMVSLRDENR
VLVKNGLQVLKASERVGLQELMALSNVDFDQFNEDVIGFKLAPQLNALGRLDDPNPALEL
LTGFDEEEAQQIAVMINEKNEERKELVQAIFDQAKEMINLDRPIQVLAKEGWHPGVLGIV
AGRIMEEISQTVIVLAIDNGIAKGSARSIEAINMVEALNRDKGLLTAFGGHPGAAGMTLP
AKNLEALSESLSAYIAENNIDCQQKNSLHIDQELDLSQLSLETLKSLNQLAPFGMDNTKP
LFLVKDFTLVQARTLGADNKHLKLRIQKASVETDVLAFNQGHLSQEFQQVKGLELVVTLS
VNTWNGNTSLQLMLVDARVHGLQLFDVRAKNATVPQHVPNIFDKSDSRQVLIDHIPDNLD
DLKELIQTNDFDAVYFKNRIEKPYYLSGFGTKEQFARLYKTIYQFPEFDIRFKLNELSQY
LKIDKLLVIKMIQIFEELGFVSIEDGVMTVIKNAEKKAIDSSQIYQDLKELVKMQEIMAL
ATPEEIFAYLKEQ
NT seq 2202 nt   +upstreamnt  +downstreamnt
atgataagaagtaaatacaaatggaaaatacaagaagaggagccagatgctggcttcttt
aagcttgccaaagcacaaggtttaacgaaagaagccgctgaaattgtctttgaaagaggc
ataaaagatgagaacagtctgtctcaatttttaaaggccgatttgtcctcattacataat
ccttatttgctttaccaaatggataaggctgttggccgaattcgtcaagctattgaaaat
gctgaaactattttggtttatggtgattatgatgcagacggcatgacggcagcttctatc
atgaaagaaacccttgagatgatggggtcagaaccgttagtgtatctgccaaatcgtttt
actgatggttacggccccaacaaaagtgtctataaatattttatggatcaagaggcagtt
agtcttattattactgtagataatggtgttgctggtcacgaagctattgactatgcccaa
gaaaatggtgtggatgttattgtaacagaccatcatcatttgcctgatgatttgccaaat
gcctatgccattattcatccagagcatccagaaggacagtatccttttcaaaaacttgca
ggttgtggtgttgcttttaagttggcgactgctttattagaaagtattccaacagaattt
ttagatttggttgctattgggactatcgcagatatggtgagtttacgtgatgaaaaccgt
gttttggtcaaaaatggtctacaggttctaaaagctagcgagcgtgttggtctccaagaa
ttaatggcactttctaatgttgattttgatcagtttaatgaggatgttatcggtttcaaa
ttagccccgcaattaaatgcattagggaggcttgatgatccaaacccagctttagaactc
ttgacaggttttgatgaagaagaagctcagcaaatagcagtcatgatcaatgaaaaaaac
gaagaacgtaaagaattggttcaagctatctttgatcaagctaaagaaatgatcaatctt
gatagacctattcaggttttggctaaagaaggttggcatccaggagttctagggattgta
gctggacgtatcatggaagaaatcagtcaaaccgttattgttttagctattgacaatgga
atcgctaaaggctctgccagaagtatcgaagctattaatatggttgaagcacttaacaga
gataaaggtcttttaacggcatttggtgggcatcctggcgctgctggcatgacattacct
gccaaaaatcttgaagctttgtcggaatctttatctgcttatattgctgaaaataacatc
gattgccaacaaaaaaatagtttacatattgatcaggaattagatttgagtcagctcagt
cttgagaccttgaaatctctcaatcaattggcaccatttggtatggacaacacaaagcca
ctttttttagtaaaagactttacattagttcaagctagaactttaggtgctgataataaa
catttgaaattgcgcattcaaaaagcatctgtggagacagatgtcttagcctttaatcaa
ggtcatcttagccaagagtttcaacaagttaaaggtcttgagttagttgttaccttatca
gtcaatacttggaatggaaatactagccttcaattaatgttagtggatgcacgtgttcat
ggtttgcaactttttgatgttagggcaaaaaatgcgacagttcctcaacatgttcctaat
atttttgacaagagtgatagtaggcaggtattaattgatcatattccagataacttggat
gacctaaaagaattgattcaaaccaatgactttgacgctgtttattttaaaaatagaatt
gaaaaaccctactatttatcaggttttggcacaaaagagcagtttgcaagattgtataaa
accatctatcaatttccagaatttgacatccgtttcaaactaaatgaactcagccaatac
ttaaaaattgataagcttttagtgattaaaatgattcaaatttttgaagaattaggcttt
gtttcaattgaagatggggttatgacggtcatcaaaaatgctgagaaaaaagcaattgac
agtagtcaaatttatcaagatttaaaagagttggttaaaatgcaagaaatcatggcacta
gcaacaccagaagaaatctttgcctatcttaaggagcaataa

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