Streptococcus iniae ISNO: DW64_08930
Help
Entry
DW64_08930 CDS
T03286
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
sio
Streptococcus iniae ISNO
Pathway
sio03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sio00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DW64_08930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sio03019
]
DW64_08930
Messenger RNA biogenesis [BR:
sio03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DW64_08930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
SIS_2
Motif
Other DBs
NCBI-ProteinID:
AHY18426
UniProt:
A0A1S1XY28
LinkDB
All DBs
Position
1793472..1795154
Genome browser
AA seq
560 aa
AA seq
DB search
MSNIDLKPNEVGVFAIGGLGEIGKNTYGIEYQDEIIIVDAGIKFPEDDLLGIDYVIPDYS
YIVDNIDRVKALVITHGHEDHIGGIPFLLKQANVPIYAGPLASALIRGKLEEHGLLRDSK
MYEIHHNTELTFKNLSVTFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVGEPADI
HRMAALGEDGVLCLLSDSTNAEVPTFTNSEQEVGKSILKIIEGIHGRIIFASFASNIFRL
QQAAEAAVKTGRKIAVFGRSMEKAIVNGIELGYIKVPKGTIIEPNEIKNYHANEVLIMCT
GSQGESMAALARIANGTHRQVTLQPGDTVIFSSSPIPGNTTSVNKLINTIQEAGVDVIHG
KVNNIHTSGHGGQQEQKLMLRLMKPKFFMPVHGEYRMQKVHAGLAEDTGIPEENIFILEN
GDVLALTSDSARRAGHFNAQDIYVDGNGIGDIGTAVLRDRRDLSEDGVVLAVATVDFDTQ
MILAGPDILSRGFIYMRESGDLIRESQRVLFNAIRIALKNKDASIQSINGSIVNALRPFL
YEKTEREPIIIPMVLTPDKD
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatatcgatttaaaacctaacgaagtcggcgtctttgccattggtggtctaggg
gaaatcgggaaaaacacttacggaattgaataccaagatgaaatcatcattgttgatgct
ggtattaaattccctgaggatgatcttttaggtattgactatgttatccctgattattct
tacatcgttgataacattgaccgtgttaaagctcttgttattacgcatggtcatgaagac
cacatcggtggtatcccattcttgcttaaacaggctaatgtcccaatttacgccgggcca
ttggcgtcagcccttattcgtggaaaattagaagaacacggtttactgcgtgattctaaa
atgtacgagattcaccacaatacagagttaacctttaaaaacttaagcgtgactttcttc
cgtacaacccactctattccagaaccgcttggtattgtcattcatacccctcaagggaaa
attgtctgtaccggtgactttaagtttgacttcacacctgtcggagagccagctgatatt
catcgcatggctgcacttggggaagatggggttctttgcctcttatctgactcaacaaat
gctgaagttccaacctttactaattctgaacaagaagttggtaaatcaatccttaaaatc
atcgaaggcattcacggacgcattatctttgcatcttttgcttcaaatattttccgtttg
caacaagctgctgaagctgccgttaaaacaggtcgtaagattgctgtctttggtcgctca
atggaaaaagctattgtcaacgggattgaacttggctatatcaaggttccaaaaggcact
attattgagccaaatgaaatcaaaaattaccatgctaacgaagtgttaatcatgtgtact
ggtagccaaggggagtctatggctgcactagcaaggattgcaaatggtacgcaccgtcag
gttactctacagcctggtgataccgttatattctcgtctagtccaatccctggtaataca
acaagtgttaacaaacttatcaataccattcaagaagctggtgttgatgttattcacggc
aaggttaataatatccacacatctggtcatggtggtcaacaggagcaaaaattgatgctt
cgtttgatgaaaccaaaattcttcatgcctgttcatggtgaataccggatgcaaaaagtt
catgctggcttagctgaggatactggaatccctgaagaaaatattttcatccttgaaaat
ggtgatgtccttgctttaacaagtgattctgcgcgacgtgcggggcacttcaacgcacaa
gatatttatgttgatggtaatggtattggtgatattggaacagcagttttgagagatcgt
cgtgacctttcagaagatggtgttgttcttgcagttgctactgttgactttgacacacaa
atgattcttgcaggtccagacattttaagtcgtggttttatctatatgcgtgagtctggt
gatttgattcgtgaaagccaacgcgttttatttaatgctattcgtatcgctcttaaaaac
aaagatgctagcatccaatctattaacggctctatcgttaacgccttacgcccattctta
tacgaaaaaacagaacgtgaaccaattattattccaatggttctcacacctgataaagat
taa
DBGET
integrated database retrieval system