Streptococcus ilei I-P16: N597_02490
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Entry
N597_02490 CDS
T02880
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
sip
Streptococcus ilei I-P16
Pathway
sip03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N597_02490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sip03019
]
N597_02490
03009 Ribosome biogenesis [BR:
sip03009
]
N597_02490
Enzymes [BR:
sip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
N597_02490
Messenger RNA biogenesis [BR:
sip03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
N597_02490
Ribosome biogenesis [BR:
sip03009
]
Prokaryotic type
rRNA helicases
N597_02490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
DUF6363
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AGY37824
LinkDB
All DBs
Position
461501..463075
Genome browser
AA seq
524 aa
AA seq
DB search
MKFNEFNLSADLLAEIEKAGFVEASPIQEQTIPLALEGKDVIGQAQTGTGKTAAFGLPTL
EKIRTEEATIQALVIAPTRELAVQSQEELFRFGRSKGVKVRSVYGGSSIEKQIKALKSGA
HIVVGTPGRLLDLIKRKALKLQDIETLILDEADEMLNMGFLEDIEAIISRVPENRQTLLF
SATMPDAIKRIGVQFMKEPEHVKIAAKELTTELVDQYYIRVKEQEKFDTMTRLMDVDQPE
LSIVFGRTKRRVDELTRGLKIRGFRAEGIHGDLDQNKRLRVLRDFKNGNLDVLVATDVAA
RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKSGQSITFVSPNEMGYLQIIENLTKK
RMKGLKPASAEEAFQAKKQVALKKIERDFANEEIRSNFEKFGKDARQLASEFSPEELAMY
ILSLTVQDPDSLPEVEIAREKPLPFKPSGGGFGGKGKSGRGGRRGDDRRDRERRGNGRRD
EYRKGGRSKDRFDKEKRYRKDHKKPRNTSSEKKTGFVIRNKGDK
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
gtgaaatttaatgaatttaatctttctgctgatttgttagcagaaattgaaaaagcagga
tttgtagaagcaagtcctatccaagagcaaaccattcctttggctcttgaaggtaaagat
gtaatcggtcaagcacagaccggaacagggaaaacagccgcctttggcttgccaaccctt
gaaaaaattcgtacagaagaagcaactatccaagctttggtcatcgcaccaactcgtgaa
ctggctgttcaaagccaggaagaactcttccgctttggtcgtagtaagggtgtgaaagtc
cgttcagtctacggtggttcaagcattgaaaaacaaattaaggcacttaaatcaggggct
catatcgttgtaggaacaccgggacgtttacttgacttgatcaaacgcaaggccttgaaa
ttacaagatattgaaactcttatccttgatgaagcagacgaaatgctgaatatgggattc
cttgaagacatcgaagcaatcatctcacgtgtcccagaaaatcgtcaaaccttgctcttt
tcagcaaccatgcctgatgccatcaaacggatcggtgttcaattcatgaaagaacctgag
catgtgaagattgctgctaaggaattgacaacagaattggtagaccagtactatatccgt
gttaaggaacaagaaaaatttgacaccatgacacgtctgatggatgttgatcaacctgaa
ttgtcaatcgtttttggtcgtaccaaacgccgtgtagacgagttaactcgtggattgaag
atccgtggtttccgtgcagaagggattcatggagatttggaccaaaacaaacgtcttcgt
gtccttcgtgattttaaaaatggcaacctcgatgtcctcgttgcaacagacgttgctgct
cgtggtttggatatctcaggtgtgacccatgtctacaactatgatattcctcaagaccct
gagagttatgttcaccggattggtcgtacagggcgtgcaggtaagtcaggtcagtcaatt
accttcgtttcacctaatgaaatgggttatctccaaatcattgagaacttgactaaaaaa
cgcatgaaaggtctcaagccagcaagtgcagaagaagcctttcaagctaagaagcaagta
gctcttaagaaaatcgaacgtgattttgctaatgaggagattcgtagcaactttgagaag
tttggcaaggatgctcgtcaattggcctcagaattcagcccagaagaattggctatgtat
atccttagcttaacagttcaggatccagatagtcttccagaagttgaaattgcgcgtgaa
aaaccactgccgtttaaaccgtctggtggtggatttggcggaaaaggcaagtctggtcgc
ggtggccgtcgtggagacgaccgtagagaccgtgaacgccgtggcaatggacgtcgtgat
gaatatcgtaaaggtggacgctcaaaggatcgatttgataaagagaagcgttaccgcaag
gatcataaaaaacctcgcaatacttcaagtgagaagaaaacaggctttgtgattcggaac
aaaggggataaataa
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