Streptococcus ilei I-P16: N597_03390
Help
Entry
N597_03390 CDS
T02880
Name
(GenBank) single-stranded DNA exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sip
Streptococcus ilei I-P16
Pathway
sip03410
Base excision repair
sip03430
Mismatch repair
sip03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
N597_03390
03430 Mismatch repair
N597_03390
03440 Homologous recombination
N597_03390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sip03400
]
N597_03390
DNA repair and recombination proteins [BR:
sip03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
N597_03390
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
N597_03390
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
N597_03390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
AlaDh_PNT_C
L27
Motif
Other DBs
NCBI-ProteinID:
AGY37999
LinkDB
All DBs
Position
655545..657758
Genome browser
AA seq
737 aa
AA seq
DB search
MITSKYEWQFAKPFSDDTFLAQAKKRGLEASAAKLLGERGIQTEEALDRFLEPRLEDLHD
PYLLHDMDKAVDRIRQAIEDYEHILVYGDYDADGMTAASIMKETLEQMGAEVAVYLPNRF
TDGYGPNASVYKYFIEQQGISLIITVDNGVAGHEAIDLAQSMGVDVIVTDHHAMPEVLPD
AYAIIHPEHPDADYPFKHLAGCGVAFKLACALLEEVPLDFLDLVAIGTIADMVSLTDENR
ILVKYGLGVLRQTQRIGLQEMLKLASIAPQDVNEETVGFQIAPRLNALGRLDDPNPAVEL
LTGFDDEEALEIALMIQAKNEERKEIVQAIYDEAKAMVDPSLPVQILAKEGWNPGVLGIV
AGRLLEELHQPIIVLTIDQGKAKGSARSPESVHIFEALDPHRDLFIAFGGHAGAAGMTLE
VDNLPRLTEIFSDYIREKGIDLTAKSTLFVDEELDLEELTLDTLKSFDRLAPFGMDHKKP
VFYIRDFQVESSRTMGAGNSHLKLKIQKGNARFDVVAFGQGHLELEFSQAKNLELVVSLA
INQWNGQTTLQLMMVDARVEGVQLYNIRGKNAPLPQAIPLFSQLEGGVESPAIVIDRIPD
DLTELKALFQEQSFQAVYFKNHLDKAYYLTGYGNRDQYAKLYKTLYQFPEFDIRHKLSQL
SDYLKIPQVLLIKMIKIFQELGFVQIENGIMTVNKDAEKKEITSSSIYQDLVQTVKDQEL
MALGSVQEIYDYLTESM
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgatcacgtcaaaatatgaatggcagtttgctaagcccttttcagatgatacgtttttg
gcgcaagcaaagaagagaggattagaagcatccgcagccaagttactgggagaaagaggg
atccagacggaagaagcgctggatcgttttctagaaccgcggctagaagatctccatgat
ccctacctgcttcacgatatggacaaggcagtggatcggattcgccaagctattgaagat
tatgaacacatcctagtatatggggactatgatgcagacgggatgacggccgcttctatc
atgaaggaaaccttggagcagatgggggcggaagtagcagtctatctacccaaccgcttt
acagatgggtacggtcccaatgccagtgtctacaagtactttatcgaacagcaagggatt
tccctcatcatcacggtagacaatggagtagctggacacgaagccattgacttggcccaa
agcatgggagtagatgtcattgtgacggaccaccatgccatgccagaagtcttaccagat
gcctatgccattattcacccggaacatccagatgccgattaccctttcaagcatctagca
ggctgtggggttgcctttaagttggcctgtgcccttctagaggaggtgcctctagatttt
ctagatttggtagccattgggaccattgcggatatggtcagtttgacagatgaaaaccgc
atcttagtcaagtatggcctaggtgtccttcgtcaaacccaacggatcggccttcaggaa
atgctcaagttggcctccatcgcccctcaagatgtaaatgaagaaacggttggtttccag
attgcccctcgtctcaatgccttgggtcgcttggatgaccctaatccagcggtcgagctc
ttgacaggctttgatgatgaagaagcactagagattgctctgatgattcaagctaagaat
gaagagcgcaaggagatcgtgcaagccatctatgatgaggccaaagctatggtcgatcca
agtcttccggttcaaatcttggccaaggaaggatggaatcctggtgtcttaggaatcgtg
gctggtcgactgctagaagagctccatcagcccatcatcgtcctaaccatagaccaaggc
aaggccaagggtagtgcgcgaagtccagaaagtgtccatatcttcgaagccctggatccc
catcgtgatctttttatcgcctttgggggccatgcgggtgcagctggtatgacgttggaa
gtagataatcttcctcgcctgaccgagattttttctgattatattcgtgaaaaagggatt
gacctgacggctaaatctactctctttgtagatgaggagttggaccttgaagagctgacc
ttggataccttgaagagctttgatcgtttagcaccttttgggatggaccataagaaaccc
gtcttttacattcgagatttccaagtggagtctagccggaccatgggagccggcaatagc
catctgaagttgaagattcaaaaaggcaatgcccgctttgatgtggtggcttttggtcag
ggccatttggaattggaattctcccaagcgaaaaatttggagttggtggtatccttggcc
atcaatcaatggaatggacagaccaccctgcaattgatgatggtggatgcccgtgtagaa
ggagtacagctttacaatatccgaggaaagaatgctcctctcccacaagccatcccactc
tttagtcagttagaaggaggggtagaatcaccagcaattgtcatcgatcgcataccagat
gacttgacagaattgaaagccctcttccaagaacagagcttccaagcggtctattttaag
aatcacctagacaaggcctattatttgaccggttatggcaaccgcgatcaatatgccaaa
ctctataagacactgtaccagttccctgagtttgatatccgccataagctgagccaacta
tctgactacctcaagattccacaggttttattgatcaaaatgatcaagattttccaagaa
ttaggctttgtccagattgaaaatggcatcatgactgtcaacaaggatgcggagaagaag
gagattacctctagctccatctatcaggacttggtgcagacggtcaaagaccaagagctc
atggccctaggatctgtgcaagaaatttatgattatttaacggaatcgatgtga
DBGET
integrated database retrieval system
