Streptococcus iniae ISET0901: DQ08_00725
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Entry
DQ08_00725 CDS
T03285
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
siq
Streptococcus iniae ISET0901
Pathway
siq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
siq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DQ08_00725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
siq03021
]
DQ08_00725
03400 DNA repair and recombination proteins [BR:
siq03400
]
DQ08_00725
Enzymes [BR:
siq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DQ08_00725
Transcription machinery [BR:
siq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DQ08_00725
DNA repair and recombination proteins [BR:
siq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DQ08_00725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
AHY15036
UniProt:
A0A1J0MWX0
LinkDB
All DBs
Position
118398..122030
Genome browser
AA seq
1210 aa
AA seq
DB search
MVDVNRFKSMQITLASPSKVRSWSYGEVKKPETINYRTLKPEREGLFDEVIFGPTKDWEC
ACGKYKRIRYKGIVCDRCGVEVTRAKVRRERMGHIELKAPVSHIWYFKGIPSRMGLTLDM
SPRALEEVIYFAAYVVIDPKETPLEPKSLLTEREYREKIQEYGYGSFVAKMGAEAIQDLL
KRVDLPTEIAELKEELKSATGQKRIKAVRRLDVLDAFNKSGNKPEWMVLNILPVIPPDLR
PMVQLDGGRFAASDLNDLYRRVINRNNRLARLLELNAPGIIVQNEKRMLQEAVDALIDNG
RRGRPITGPGSRPLKSLSHMLKGKQGRFRQNLLGKRVDFSGRSVIAVGPTLKMYQCGVPR
EMAIELFKPFVMREIVAREFAGNVKAAKRMVERGDERIWDILEEVIKEHPVLLNRAPTLH
RLGIQAFEPVLIDGKALRLHPLVCEAYNADFDGDQMAIHVPLSEEAQAEARLLMLAAEHI
LNPKDGKPVVTPSQDMVLGNYYLTMEDAGREGEGMIFKDKDEAVMAYQNGYAHLHSRVGI
AVDSMPNKPWKDSQRHKIMVTTVGKILFNDIMPEDLPYLQEPNNANLTEGTPDKYFLEPG
QEIQDVIDGLELNVPFKKKNLGNIIAETFKRFRTTETSAFLDRLKDLGYYHSTLAGLTVG
IADIPVIDNKAEILEAAHHRVEEINKAFRRGLMTEDDRYVAVTTTWREAKEALEKRLIET
QDPKNPIVMMMDSGARGNISNFSQLAGMRGLMAAPNGRIMELPILSNFREGLTVLEMFFS
THGARKGMTDTALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGLLIKAITDGKEVTETL
EERLQGRYTRKSVKHPETGEVLIGADQLISEDMARKIVDAGVEEVTIRSVFTCATKHGVC
RHCYGINLATGDAVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVASNTDITQGLPRIQE
IFEARNPKGEAVITEVKGTVVDVEEDASTRTKKVFVEGKTGKGEYIVPFTARMKVEIGDE
VNRGESLTEGSIQPKRLLEVRDTLSVETYLLAEVQKVYRSQGVEIGDKHVEVMVRQMLRK
VRVMDPGDTELLPGTLMDIADFTDANKDIVISGGNPATSRPVLMGITKASLETNSFLSAA
SFQETTRVLTDAAIRGKKDHLLGLKENVIIGKIIPAGTGMARYRNIEPQAINEVEIIEEP
TVEETVVSEN
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
gtggttgacgtaaatcgttttaaaagtatgcaaatcacattagcctcaccaagtaaagtc
cgttcatggtcttatggtgaagttaaaaaacctgaaacaatcaactaccgtacactaaaa
ccagaacgtgaaggactttttgatgaagttatctttggtccaacaaaagattgggagtgt
gcctgtgggaaatacaaacgtatccgttataaagggattgtttgtgaccgttgtggtgtt
gaagtaacccgtgccaaagttcgtcgtgaacgcatgggacatattgagttgaaagcacca
gtttcacatatctggtatttcaaaggaattccatctcgtatgggattgactcttgatatg
agtcctcgagctcttgaagaagttatctatttcgcagcttatgttgtgattgatccaaaa
gaaacacctttagagcctaaatcattattaacagagcgtgaataccgcgaaaaaattcaa
gaatatggctatggttcatttgtcgctaagatgggtgcagaagctattcaagatctcttg
aaacgtgttgatttaccaacagaaattgctgaattgaaagaagaactgaaatcagcaact
ggtcaaaaacgtattaaagcagttcgtcgtttagatgttctagatgccttcaacaaatca
ggcaataaacctgagtggatggtattgaacattcttccagttattccgccggatttacgt
ccgatggttcaattggatggtggacgttttgcagcatcagatttgaatgacttataccgt
cgtgttattaaccgtaataaccgtttagcacgtcttttagagttaaatgctccaggaatc
atcgttcaaaatgaaaaacgtatgcttcaagaagcggttgatgctttgattgacaatggt
cgtcgtggtcgtccaatcacaggtcctggtagtcgtccattgaaatctttgagccatatg
cttaaaggtaaacaagggcgtttccgtcaaaacttgcttggtaagcgtgttgacttctca
gggcgttcagttattgctgttggtcctactttgaaaatgtatcaatgtggtgtgccacgc
gaaatggcaatcgagctcttcaaaccatttgtaatgcgtgaaattgttgcccgcgaattt
gctggaaacgttaaagcagcaaaacgtatggttgaacgtggcgacgaacgtatttgggat
atcttagaagaagttatcaaagagcacccagtacttcttaaccgcgcacctactcttcac
agacttggtattcaagcatttgaacctgttcttatcgatggtaaagcccttcgtcttcac
ccgcttgtatgtgaagcctacaatgctgacttcgatggagaccaaatggccatccacgtc
ccactttctgaagaagcacaagctgaggctcgtttgttgatgcttgcagcagagcacatc
cttaaccctaaagatggaaaaccagttgttacaccatctcaggatatggttttagggaat
tactacctaacaatggaagatgctggtcgtgaaggtgaaggaatgatcttcaaagacaaa
gatgaagctgttatggcttaccaaaatggctatgctcacttacatagtcgtgttggtatc
gcagttgattcgatgcctaacaaaccttggaaagatagtcaaagacacaaaatcatggta
actactgttggtaagattttgtttaatgacatcatgccagaagatcttccatatttgcaa
gaaccaaacaatgctaacttaacagaaggtactccagataaatacttccttgaaccaggt
caagaaatccaagacgttattgacggtttggaactcaatgtcccattcaagaagaaaaat
ctaggaaatatcatcgctgaaactttcaaacgtttccgcacaacagaaacatcagctttc
cttgaccgcttgaaagacttaggttactaccattcaacacttgctggtttaacagttggt
attgctgatattccagttattgataataaagctgaaattcttgaagctgctcaccatcgt
gttgaagaaataaacaaagccttccgtcgtggtttgatgactgaagatgatcgttatgtt
gctgttacaacaacatggcgtgaagcaaaagaagcgcttgaaaaacgtctgattgaaaca
caagatcctaaaaacccaatcgttatgatgatggactcaggtgcccgtggtaacatctca
aacttctcacagcttgccggtatgcgtggtttgatggctgctcctaacggacgtatcatg
gaattgcctatcctttcaaacttccgtgaaggtttgaccgttttggaaatgttcttctca
acccatggtgctcgtaaagggatgaccgatacagcccttaagacagccgactctggttac
cttactcgtcgtttggttgatgttgcccaagatgttattatccgtgaagatgattgtgga
actgaccgaggtcttctcattaaagctatcacagatggcaaagaagttacagaaacactt
gaagaacgccttcaagggcgttatactcgtaaatcagtgaagcatcctgaaactggtgaa
gttcttatcggagctgatcaattgatttcagaagatatggcccgtaaaattgttgatgca
ggcgttgaagaagtaacaattcgttcagtcttcacatgtgctacaaaacacggtgtatgt
cgtcactgttatggtatcaaccttgcaacaggtgatgctgttgaagttggtgaagcagtt
ggtacaattgccgctcaatcaatcggtgagcctggtacacagcttacaatgcgtaccttc
cataccggtggtgttgcgtcaaataccgatatcactcaaggtcttcctcgtatccaagaa
atctttgaagcacgtaaccctaaaggggaagctgttatcactgaggttaaaggtaccgtt
gttgacgttgaagaagatgcttcaacacgtactaagaaagtatttgttgaaggtaaaact
ggtaaaggtgaatacatcgttccatttacagctcgtatgaaagttgaaattggcgacgaa
gttaaccgtggtgagtctctaactgaagggtcaatccaaccaaaacgtcttcttgaagtc
cgtgatacattgtcagttgagacatacttacttgctgaggtacaaaaagtttaccgtagc
caaggggtagaaatcggggacaaacacgttgaagttatggttcgtcaaatgctccgtaaa
gttcgcgttatggatccaggtgatacagagcttcttccaggaacacttatggacattgca
gactttactgatgccaacaaagatattgttatctcaggtggtaaccctgcaacatcacgt
cctgttcttatggggattacaaaagcctcacttgaaaccaattcattcttgtcagctgca
tccttccaggaaacaactcgtgtccttacagatgctgctatccgtggtaagaaagatcac
ctacttggtcttaaagaaaatgttatcatcggtaaaatcatcccagctggtactggtatg
gcacgctaccgtaacattgaaccacaagcaattaatgaagttgaaattattgaagaacca
actgttgaagaaacagtcgtttcagaaaattaa
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integrated database retrieval system
