Streptococcus iniae ISET0901: DQ08_08605
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Entry
DQ08_08605 CDS
T03285
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
siq
Streptococcus iniae ISET0901
Pathway
siq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
siq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DQ08_08605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
siq03400
]
DQ08_08605
Enzymes [BR:
siq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DQ08_08605
DNA repair and recombination proteins [BR:
siq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DQ08_08605
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
HHH_5
UvrD-helicase
AAA_12
DEAD
AAA_22
nSTAND3
AAA_28
AAA
TsaE
HHH
DUF815
NPHP3_N
SLFN-g3_helicase
NTPase_1
AAA_17
AAA_16
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
AHY16500
UniProt:
A0ABM5QK46
LinkDB
All DBs
Position
1725374..1727755
Genome browser
AA seq
793 aa
AA seq
DB search
MEYYFSGTIDRIIFENASNFFKILLLTVEDTDSDMDDFEIIVTGTMADVIEGEDYTFWGE
LTQHPKYGQQVKLNRYERAKPTASGLIKYFSSDHFKGIGKKTAEKIVSIYGEHTIDKILE
DPSKLDTISGFSKANRDAFVTKLKVNYGTEQIIAGLVELGISNNFAFQIFDLYKDDSVAM
VKENPYRLVEDIQGIGFKMADSLAEEIGIASDSPKRFRAALLHCLLEQSISQGDTYIEAR
DLLEYAITLLEDSRQIECNPESVAKELSQLIADGKVHNVATRIFDASLYKAEEGIKKHLT
RLMDHPLDKSIAETDIDTQIKNIEKKHQIQYDSVQKQAIIQALTSKVFILTGGPGTGKTT
VIKGILEAYASIHELDLQGKDLPIILAAPTGRAARRMNELTGLPSATIHRHLGLNGNNDY
QSMEDFLDCNLIIVDEFSMVDTWLANHLLGALSSDTQLIIVGDSDQLPSVGPGQVLADLL
KISSIPQIALQKIFRQSEDSTIVDLANQMRQGLLPPDFKAKKADRSYFDALPQHIPSMVT
KIVSAAINSGISEDEIQILAPMYKGQAGITNLNQLMQDLLNPLDGQSEFAFNDLKFRKND
KVLHLVNDTQQNVFNGDIGYITDLIPAKYTESKQDEIVMDFEGTEVSYPRNEWLKITLAY
AMSIHKSQGSEFQVVILPITRQSGRLLQRNLIYTAVTRSKSKLILLGEYAAFDYAIQNEG
DKRKTYLVQRFTPEGIDNNTVEGTDTTSQKAKDQPPSQEDLITTDKEYILTSENMLEIDP
MIGLSQDDIASFF
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggaatactatttctctggcacaattgatcgtatcatttttgaaaatgccagcaatttc
tttaaaattcttttgctgactgttgaagacacagatagtgacatggatgattttgaaatt
atcgtaactgggaccatggccgatgtcatcgaaggtgaggattatactttttggggcgag
ttaacacaacacccaaaatatggtcagcaagttaaattaaaccgctatgagcgagctaaa
ccaactgcatcaggtcttattaaatatttttctagcgaccattttaaagggattggtaaa
aaaactgccgaaaaaattgtttccatctatggtgaacataccattgataaaatcctagaa
gaccctagtaagttagacacaatctccggattttcaaaagccaatcgtgatgcttttgtc
accaaattaaaagtcaattatggcactgaacaaattattgcaggacttgtagaattaggc
atctcaaacaactttgcctttcaaatttttgacttgtataaagacgattctgtcgccatg
gtcaaagaaaacccttaccgtttggttgaggatatccaaggaattggctttaaaatggct
gatagtttagcagaagaaattggaattgctagcgattccccaaaacgttttcgtgctgcc
ctcttacactgcctattggaacaatccattagtcaaggtgatacctatattgaagcaaga
gatctcttggaatacgccattaccttacttgaagatagtcgtcagatcgaatgcaatccc
gaaagcgttgctaaagaactaagccaactgattgctgatggtaaggttcataatgttgct
actcgaatttttgacgccagcctttataaggcagaagaaggcattaaaaaacacctcact
cgtctgatggatcatcctttagataaaagcattgctgaaacagatattgatacgcaaatc
aaaaatattgaaaaaaaacatcagattcagtacgattcggttcaaaaacaagctatcatc
caggcattgaccagtaaagtcttcattctaacagggggacctggaactggaaaaacaact
gttattaaaggcattttagaagcctatgctagcatccatgaacttgacttacaaggaaaa
gaccttccgattatactagctgctccaacagggcgtgctgcaagacgcatgaatgaattg
acagggcttcctagtgctaccattcacaggcacttaggtctcaatgggaataatgattat
cagtcaatggaagattttcttgattgcaatcttatcatcgttgatgaattttctatggtc
gacacctggttggctaaccacttattgggagccttgtcatctgatacccaattaattatt
gttggagatagtgaccaattaccatctgttggccccggccaggttttagcagatttattg
aaaatttctagcattcctcaaattgctttacagaaaatttttcgtcaatccgaggattca
actatcgttgacttggccaaccaaatgcgccaaggtctcctaccacctgatttcaaagct
aaaaaagctgaccgttcctattttgatgccctgccccaacacatcccttccatggtaaca
aagattgtcagcgcagctatcaacagtggcatctcagaggatgaaatccaaattttagct
cctatgtataagggacaagctggcattactaatctcaaccaattgatgcaagacttactt
aatcctcttgatgggcaaagcgagtttgcctttaatgacttgaaattccgaaaaaatgac
aaagtcctccatctggttaatgatacccaacaaaatgtctttaatggtgatattggttac
atcaccgatttaatccctgctaaatacaccgaatctaaacaagatgaaattgtgatggat
ttcgaaggtactgaagtctcctaccctcgtaatgaatggttaaaaatcacccttgcttat
gctatgagcattcataaatcccaaggaagtgaatttcaagtggtcattcttcccatcaca
cgtcaaagtggtcgtctcttgcagcgaaacctcatttatactgctgtaacacgctcaaaa
agtaaactcattcttttgggagaatatgctgcttttgactatgccatccaaaatgaaggg
gataagcgaaaaacctatctggttcaacgctttacaccagaggggattgacaataacact
gttgagggaacagataccacctcacaaaaggcaaaagatcagcccccttctcaagaagac
ctcataacaacagataaagaatacatcctaaccagtgagaatatgctagagattgatccc
atgattggtttaagtcaggacgacatcgcatcatttttttga
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