KEGG   Saccharolobus islandicus REY15A: SiRe_1280
Entry
SiRe_1280         CDS       T01953                                 
Name
(GenBank) nucleotide excision repair nuclease, Xpf
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
sir  Saccharolobus islandicus REY15A
Pathway
sir03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sir00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    SiRe_1280
   03460 Fanconi anemia pathway
    SiRe_1280
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sir03032]
    SiRe_1280
   03400 DNA repair and recombination proteins [BR:sir03400]
    SiRe_1280
DNA replication proteins [BR:sir03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    SiRe_1280
DNA repair and recombination proteins [BR:sir03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     SiRe_1280
SSDB
Motif
Pfam: ERCC4 HHH_5 HHH_2 IMS_HHH_1
Other DBs
NCBI-ProteinID: ADX85347
UniProt: F0NF67
LinkDB
Position
1216529..1217230
AA seq 233 aa
MVIRIYADDREKASGIPELLKELGITVIFSQLSVADYVIGEDAAVERKSVNDLVNSVFDK
RFFDQISRLSEVYNFPMLIVEGDINEIRKITEKWRAINNALISATIDYDVKVFYSRDKKD
TAEVLKKIAEKYQFGENGSRRINLHNKAKLESISDMQLYIVESFPNVGSVLAERLLLKFG
TIQNICNASISELEKALGSRKKAEDIYKILRAHYSKTNADNDSKKSTSLFDFL
NT seq 702 nt   +upstreamnt  +downstreamnt
atggtaattagaatttatgctgatgatagggaaaaggctagtggtataccagaattatta
aaggagttgggaattacagtaatattctctcaacttagtgttgctgattatgtgataggt
gaagatgctgcagtagagaggaagtcggtaaatgatttggtaaattcggtttttgacaag
aggttttttgaccaaatcagtaggctttcagaggtttataattttccaatgttaattgtt
gaaggtgatattaatgaaattaggaaaataactgaaaagtggagagcgataaataacgct
ttaatttctgccacgattgattatgatgttaaagtattttattctagagataaaaaagat
actgcggaagttttgaaaaaaatagcagagaagtatcaatttggcgaaaatgggagtagg
agaattaatttacataataaggctaaactagaaagtatttctgatatgcaactttatatt
gtagaatcttttcctaatgttggttctgtacttgctgaaaggctactacttaagtttgga
actatacagaatatttgtaatgcgtctatatcagaattggaaaaagcattaggtagtagg
aaaaaagctgaggatatttataaaattttaagggcacactattctaaaactaacgctgat
aatgatagtaagaaaagtacctctttatttgatttcctttaa

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