Saccharolobus islandicus L.S.2.15: LS215_2937
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Entry
LS215_2937 CDS
T00889
Name
(GenBank) Xylose isomerase domain protein TIM barrel
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
sis
Saccharolobus islandicus L.S.2.15
Pathway
sis03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LS215_2937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sis03400
]
LS215_2937
Enzymes [BR:
sis01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
LS215_2937
DNA repair and recombination proteins [BR:
sis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LS215_2937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
UvdE
Amidohydro_1
DUF7219
DeoC
KARI_C
Motif
Other DBs
NCBI-ProteinID:
ACP36865
UniProt:
C3MNC2
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All DBs
Position
2710480..2711310
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AA seq
276 aa
AA seq
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MVKIYLGPAGIPHSSKKKNTIEGIRTVKELGLNAMEVEFVQGVRMSRETAEETGQVAKEL
GVRLSVHAPYFINLCSEEKDKIDASKQRILDTADRAELMGADAIAIHIAFYGKMSPEECY
QNVKEGLAEVIDKAKEMGIKNVKFGVETMAKETAFGTLDEVISISKELKGVIPYIDWAHT
FARQGGEIDYGKIIDRLIKELGLTHINSHFESLVSRKGKYVDEHIPIDANAPPFEPLAKE
LLKRDISITLICESPELERDALKMKEVLESLGYRLE
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggtaaagatttacttaggtcctgcgggaattccgcactcctctaaaaagaagaatacg
atcgagggtataaggactgttaaagagttaggcttaaacgctatggaagttgagttcgtg
caaggtgtaagaatgagcagggaaactgcagaggaaactggacaagttgctaaggaattg
ggagttaggttatcggttcacgctccatatttcatcaatttgtgttccgaggaaaaagac
aaaattgatgcttcgaagcagagaattttagatacagctgacagggctgagttaatggga
gctgatgctatagctattcatattgcattctacggtaaaatgagcccagaagaatgttat
caaaacgttaaggaaggattagcagaggtaatagataaggctaaggaaatgggtataaag
aacgttaagtttggtgttgaaactatggctaaggaaactgcttttgggactttagatgaa
gtcatctcgatatctaaagagctaaagggcgtaataccctacatagattgggctcatact
tttgctaggcaaggtggggaaatagattatgggaagattatcgataggctaattaaggaa
ttaggtttgactcatataaattctcacttcgaatctctagtttctaggaaaggaaaatat
gtggatgagcatattcccatagatgctaacgccccaccgtttgaaccattagctaaggaa
ttgcttaaaagggatatttcgataacattgatatgtgaaagtccagaattggaaagagat
gcgttaaaaatgaaggaggtattggagagtcttggatatagactggaatga
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