Ruegeria sp. TM1040: TM1040_0084
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Entry
TM1040_0084 CDS
T00359
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sit
Ruegeria sp. TM1040
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sit03016
]
TM1040_0084
Enzymes [BR:
sit01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
TM1040_0084
Transfer RNA biogenesis [BR:
sit03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
TM1040_0084
Prokaryotic type
TM1040_0084
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ABF62817
RoseoBase:
TM1040_0084
UniProt:
Q1GKJ9
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All DBs
Position
complement(87460..88368)
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AA seq
302 aa
AA seq
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MGRKRKGRDISGWLVVDKPAGLTSTAVVNKVRWAFDAKKAGHAGTLDPEATGVLAVALGE
ATKTVPFITDAMKAYTFTVTLGAATNTDDAEGEVIATSAERPTDDDIKEALLGFIGEIQQ
VPPKFSAVKIDGQRAYKLARDGEEVELSARPLWVEELVMLDRPDADHVVLEMTCGKGGYV
RSIARDLGEKLGCLGHVRELRRIWSGPFDAEDGVTLEQIDALAKSPEIDQFLRPLEEGLA
DLPELKCTPQGATRLRNGNPGMVIASDVEYGEEAWASLEGKAVAVGTFKAGELHPSRVFN
QD
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgggacgcaaacgcaagggacgcgacatttccggctggttggtggtggacaaacccgca
ggcctcacctcgacggcggtggtcaacaaggtccgttgggcgttcgacgccaaaaaagca
ggccatgccggtacgctcgaccccgaggcaaccggtgtgcttgcggtggcacttggcgag
gcgacaaagaccgtgccgtttatcaccgacgccatgaaagcctatacgtttaccgtgacc
cttggggcggcgaccaatacggatgacgccgaaggcgaagtgattgcgacctccgcagag
cgccccacggatgatgacatcaaagaagcactgcttggctttattggcgaaatccagcag
gtgccgccgaagttctccgctgtaaaaatcgacggtcagcgcgcctacaagctggcgcgg
gacggcgaagaagtggagctttccgcccgtccgctctgggtcgaagagctggtgatgctg
gatcgtcccgacgccgatcatgttgttctggaaatgacgtgcggcaagggcggctacgta
cgttccatcgcgcgcgatttgggcgaaaaactcggctgccttggccatgttcgagagctg
cgccggatctggtccggcccgtttgatgcagaagatggcgtgacccttgaacagattgac
gcgcttgcaaaatcacccgagatcgaccagttcctgcggccgcttgaggaggggcttgcg
gatctgcccgagctgaaatgcacaccgcaaggcgcgacccgactgcgcaacggcaacccg
ggcatggtgatcgcctctgacgtggaatatggcgaggaagcctgggcttctcttgaaggc
aaagccgtggccgtgggcaccttcaaggccggagagctgcacccttcgcgcgttttcaat
caggactga
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