Ruegeria sp. TM1040: TM1040_0119
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Entry
TM1040_0119 CDS
T00359
Name
(GenBank) branched-chain amino acid ABC transporter periplasmic branched-chain amino acid binding protein putative
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
sit
Ruegeria sp. TM1040
Pathway
sit02010
ABC transporters
sit02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
TM1040_0119
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TM1040_0119
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sit02000
]
TM1040_0119
Transporters [BR:
sit02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
TM1040_0119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Motif
Other DBs
NCBI-ProteinID:
ABF62852
RoseoBase:
TM1040_0119
UniProt:
Q1GKG4
LinkDB
All DBs
Position
125411..126694
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AA seq
427 aa
AA seq
DB search
MKLKLTSVALSALIAASPAMADLVFPDLSYRTGPYAAGGIPFSDGYNDYFTLVNERDGGI
GGVKARVIECETGYNTEKGVECYESTKGEGALVYQPLSTGITYQLIPKVTADGIPLHTMG
YGRTSAANGKVFSNVFNYPANYWDGASGVINYLLEENGGDLNGKKIALVYHNSAYGKEPI
RTLEELSKKHGFELSLLPVDHPGQEQKSQWLQIRRDRPDNVVMWGWGVMNQVAIQEASNI
RFPMENFIGVWWSGAEHDVMAAGDKADGYKAVTFHNVGRDFPIFEDIQTHVVDKGLAAGA
GDQIGNVLYNRGMYAAMLAVEAAKTAQEIHGTAEIDASMMRDGMEALSITAEKMNALGMP
NFGPSFDVSCENHGGPGLVGVTQWDAETQTWSLVSGFNPTDQEVIDALVAEDSASYAAEN
NIEERCN
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaaactgacaagcgtggcgctgagcgcactgatcgcagcaagcccggcaatg
gccgatctggtattccccgatctcagctatcgcacaggcccctatgcggcaggcggcatt
ccgttctccgacggctacaacgactatttcactctggtgaacgagcgtgacggtggcatc
ggcggcgtcaaggcacgcgtgatcgaatgtgagaccggctacaacaccgaaaaaggtgtg
gaatgctatgaatccaccaagggcgaaggcgctctggtctatcagccgctctccaccggg
atcacctatcagctgatccccaaagtgaccgccgatggcatcccgcttcacacaatgggc
tacggtcggacctcggccgccaacggcaaggtgttctctaacgtcttcaactatcccgcc
aactactgggacggggcttcgggtgtgatcaactacctgctcgaagaaaatggcggcgac
ctgaacggaaagaagatcgcgctggtctatcacaactctgcctatggcaaagagccgatc
cgcacgctggaagagctctccaagaagcacgggtttgagctgagcctgctgccggttgat
cacccgggtcaggaacagaaatcgcagtggcttcagatccgccgcgaccgtcccgacaat
gttgtgatgtggggctggggcgtgatgaaccaggtggcaattcaagaagcctccaacatc
cgcttcccgatggaaaacttcatcggcgtctggtggtccggcgctgagcacgacgtgatg
gccgctggcgacaaggcggatggctataaggccgtgaccttccacaacgttggtcgtgac
ttcccgatctttgaagacatccagacgcatgtcgtcgacaagggtcttgcggcaggcgct
ggcgatcagatcggcaacgttctctataaccgcggcatgtatgcggcgatgcttgctgtc
gaagcagccaagaccgcacaggagatccacgggactgccgaaattgacgcctctatgatg
cgtgacgggatggaagcgctctccatcacggctgaaaagatgaacgcgcttggtatgccg
aactttggtccgtccttcgatgtcagctgtgaaaaccacggcggccccggtctcgtgggt
gtgacccagtgggacgcggagacccagacctggtcgctggtttcgggctttaacccgact
gaccaagaggtgatcgacgctctggtggccgaagactccgcatcctatgcggcggagaac
aacatcgaagagcgctgcaactaa
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