Ruegeria sp. TM1040: TM1040_0200
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Entry
TM1040_0200 CDS
T00359
Name
(GenBank) SSU ribosomal protein S1P
KO
K02945
small subunit ribosomal protein S1
Organism
sit
Ruegeria sp. TM1040
Pathway
sit03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
TM1040_0200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
sit03011
]
TM1040_0200
Ribosome [BR:
sit03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
TM1040_0200
Bacteria
TM1040_0200
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
DUF3592
NHase_beta_C
Motif
Other DBs
NCBI-ProteinID:
ABF62933
RoseoBase:
TM1040_0200
LinkDB
All DBs
Position
218325..220001
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AA seq
558 aa
AA seq
DB search
MAQTTSMEEFEALLQESFEMDTPEEGSVVKGKIIAIEAGQAIIDVGYKMEGRVELKEFAN
PGEAPEVSVGDEVEVYLRAAENARGEAVISREMARREEAWDRLEKAYADDQRVEGAIFGR
VKGGFTVDLGGAVAFLPGSQVDVRPVRDAGPLMGLKQPFQILKMDRRRGNIVVSRRAILE
ESRAEQRAEVIGNLSEGQAVDGVVKNITEYGAFVDLGGVDGLLHVTDMAWRRVNHPSEIL
SIGETVKVQVIKINKETHRISLGMKQLQEDPWDLVGAKYPLESVHKGRVTNITDYGAFVE
LEPGVEGLVHVSEMSWTKKNVHPGKIVSTSQEVDVMVLEIDGAKRRVSLGLKQTMRNPWE
VFAETHPEGTQVEGEVKNITEFGLFIGLDGDIDGMVHLSDLSWDERGEDAIQNYRKGDMV
SAVVSEVDVEKERISLSIKALGGDKFADAVGGVKRGSIVTVEVTAIEDGGIEVEYEGMKS
FIRRSDLSRDRAEQRPERFSVGDKVDVRVTNIDSKTRRLGLSIKAREIAEEKEAVEQYGS
SDSGASLGDILGAALKSE
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaacaacatcgatggaggaattcgaagccctcctgcaagaaagcttcgaaatg
gacacccccgaagagggttccgttgtcaaaggcaagatcattgccattgaggccggtcag
gccatcatcgacgtcggctacaagatggaaggtcgcgtcgaactcaaagaattcgcaaac
cccggcgaagctcctgaagtttccgttggtgacgaggtagaagtctacctgcgcgccgct
gaaaacgcccgtggcgaagctgttatctcccgcgagatggcacgccgcgaagaagcatgg
gaccgcctggaaaaagcatacgcagacgaccagcgcgtcgaaggtgcaatcttcggtcgc
gtcaaaggtggcttcaccgtcgatctcggcggcgccgtggccttcctgcccggctcgcaa
gttgacgtgcgccccgtgcgcgacgcaggcccgctgatgggtctgaagcagccgttccag
atcctgaaaatggaccgtcgtcgtggcaacatcgttgtctcccgtcgtgcgatcctcgaa
gagtcccgcgccgagcagcgtgccgaagtcatcggcaacctgtccgaaggccaggcggtc
gacggtgtggtcaagaacatcaccgaatacggtgcgtttgttgacctaggcggtgttgac
ggcttgctgcacgtcaccgacatggcatggcgccgtgtgaaccacccctccgagatcctg
tccattggcgagaccgtcaaggttcaggtcatcaagatcaacaaagagactcaccgtatc
tccctcggcatgaagcagctgcaggaagatccgtgggatctggttggcgccaagtacccg
ctggaatccgttcacaagggtcgcgtcaccaacatcaccgattacggtgcatttgttgag
ctggagcccggtgtcgaaggtctggtccacgtctccgagatgtcctggaccaagaaaaac
gtgcaccccggcaagatcgtttccacctcgcaggaagtggacgtcatggttctggaaatc
gacggcgccaagcgtcgcgtgtccctgggcctcaagcagaccatgcgtaacccgtgggaa
gtgtttgcagaaacacaccccgagggcactcaggtcgaaggcgaagtcaagaacatcacc
gaattcggtctgttcatcggcctcgacggcgacatcgacggcatggttcacctctccgac
ctcagctgggacgagcgtggcgaagatgcgatccagaactaccgcaaaggcgacatggtt
tcggccgttgtctccgaagtggacgttgaaaaagagcgtatctccctgtcgatcaaagcc
ctgggcggtgacaagttcgcagacgccgttggcggcgtgaagcgtggctccatcgtgacc
gtggaagtgaccgcgatcgaagatggtggcatcgaagtggaatatgaaggcatgaagtcc
tttatccgccgctccgacctcagccgtgaccgtgccgagcagcgccccgagcgtttctct
gtcggtgacaaggtcgacgtccgcgtcaccaacatcgactccaagactcgtcgtctgggc
ctgtcgatcaaggcacgcgagatcgcagaagagaaagaagccgtcgaacagtatggttct
tccgactccggcgcgtctcttggcgacatcctgggcgcagcgctcaagagcgagtaa
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