KEGG   Ruegeria sp. TM1040: TM1040_0223
Entry
TM1040_0223       CDS       T00359                                 
Name
(GenBank) hypothetical protein
  KO
K12976  lipid A 3-O-deacylase [EC:3.1.1.-]
Organism
sit  Ruegeria sp. TM1040
Pathway
sit00540  Lipopolysaccharide biosynthesis
Brite
KEGG Orthology (KO) [BR:sit00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00540 Lipopolysaccharide biosynthesis
    TM1040_0223
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01005 Lipopolysaccharide biosynthesis proteins [BR:sit01005]
    TM1040_0223
Lipopolysaccharide biosynthesis proteins [BR:sit01005]
 Lipid A
  TM1040_0223
SSDB
Motif
Pfam: PagL
Other DBs
NCBI-ProteinID: ABF62956
RoseoBase: TM1040_0223
LinkDB
Position
complement(238456..238968)
AA seq 170 aa
MRKIIIAATLISTLLQSHALRAQELTFGLGHAEFNNEIAESGAYFSAEYLGPRDWQVWGF
DAGLGVAGHIHETGDVFFGGGLQAQRDIGRGWFIEASLMPGLYFENEARNDLGSNFEIRS
LIGIGRDLRGGKRLSLALTHMSNASLARENPGLNTITLRLHMPLGQRALN
NT seq 513 nt   +upstreamnt  +downstreamnt
atgcgcaaaatcatcattgctgctactttgatttctacactccttcagagccacgcgctc
cgggctcaggagctgacgttcgggctgggccatgcggaattcaacaatgagatcgccgag
agtggcgcgtatttctccgccgagtacctcgggccacgcgactggcaggtctggggcttt
gacgctgggctgggcgtcgcaggccacatccacgagacgggtgatgtgttttttgggggc
gggctgcaggcccagcgcgatatcgggcgcggctggttcatcgaagccagcctgatgccc
ggtctctacttcgagaatgaggcccgcaatgatctggggtccaactttgaaatccgttcg
ctgatcggcatcgggcgcgacctgcgcgggggcaagcgcctgtcactggcgctcacgcat
atgtccaacgcctctctggcgcgtgaaaacccgggcctcaatacgatcaccctgcggctg
catatgccgcttgggcaacgcgcgttgaactaa

DBGET integrated database retrieval system