Ruegeria sp. TM1040: TM1040_0309
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Entry
TM1040_0309 CDS
T00359
Name
(GenBank) PP-loop
KO
K14058
tRNA 2-thiocytidine biosynthesis protein TtcA
Organism
sit
Ruegeria sp. TM1040
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sit03016
]
TM1040_0309
Transfer RNA biogenesis [BR:
sit03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
TM1040_0309
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP_bind_3
Motif
Other DBs
NCBI-ProteinID:
ABF63042
RoseoBase:
TM1040_0309
UniProt:
Q1GJX4
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Position
complement(315963..316850)
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AA seq
295 aa
AA seq
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MLDQDLDDIHPLFQGAPQTTEFKKLRKRIVRYTREAVEQYGMVERREDGSLPKWLVCLSG
GKDSYTLLAVLYELKWRGLLPVDLLACNLDQGQPGFPATVLPEFLEKMQVPHRIEYQDTY
SIVMDKVPQGRTYCALCSRLRRGNLYRIAREEGCSAVVLGHHRDDILETFFMNLFHGGRL
ATMPPKLVNEEGDLFVFRPLAHVAEADCEKFARAMNYPIIPCDLCGSQDGLQRQQVKQIL
DTWESNSPGRRQVMFRALMNARPSHLLDPKLFDFTGLALKNIDNSTETEEIPELR
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgttggaccaggatctcgacgatattcacccgctctttcagggcgcgccacaaaccacc
gagttcaagaaactccgcaaacgcatcgtgcgctacacccgcgaggcggtggagcaatat
ggcatggttgaacggcgcgaggatggctccctgccaaaatggctggtgtgcctttcgggc
ggcaaggacagctacacgctcttggccgtactctacgagctcaagtggcgcggattgctg
ccggtggatctcttggcctgcaatctcgaccagggccagccggggtttcccgcgacggtg
ctgccggagtttctggaaaagatgcaggtgccacaccggatcgaataccaggacacctac
tccatcgtgatggataaagtcccgcaggggcgcacatattgcgcgctctgctcgcgtctg
cgtcgcggcaatctctaccgcatcgcccgcgaggagggctgctctgcagtggtgcttggt
catcatcgcgacgacattctcgagacgttcttcatgaacctgtttcacggcgggcgcctc
gccacgatgccgccaaagctggtgaacgaagagggggacctctttgtgtttcgcccgctc
gcacatgtggccgaggccgattgcgagaaatttgcccgcgcgatgaactatccgatcatt
ccctgcgatctctgcggcagccaggatgggctgcagcgccagcaggtgaaacagatcctt
gatacctgggaatcaaacagccccggacggcggcaggtgatgttccgggcgctcatgaat
gcgcgtccgtcgcatcttctggacccgaagctctttgatttcacggggcttgcgctgaaa
aatatcgataattcgacggaaactgaagaaatccccgagctgcgttaa
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