Ruegeria sp. TM1040: TM1040_0396
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Entry
TM1040_0396 CDS
T00359
Name
(GenBank) 4Fe-4S ferredoxin iron-sulfur binding
Organism
sit
Ruegeria sp. TM1040
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fer4
Fer4_7
Fer4_6
Fer4_9
Fer4_10
Fer4_2
Fer4_16
Fer4_21
LdpA_Fe-S-bd
Fer4_4
Fer4_8
Fer4_3
Fer4_17
Fer4_15
Motif
Other DBs
NCBI-ProteinID:
ABF63129
RoseoBase:
TM1040_0396
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Position
complement(404143..406101)
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AA seq
652 aa
AA seq
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MPKHPILCDCSGSQPLDSEALSAATGLPCSKVHSHLCTTESEAAAAALQDPDAIFCCGQE
SRFFTALAEELGQDAPAFLDLRDRAGWSRDALKAADVLPKMSALVSEAQLDLRPAKSVDV
VSEGLCLIVGTADAALPAAEKLQDSLGVTVLLTDAAEPPLSRGFDTIRGQLRSAQGALGG
FEITVDALQSLDVTGREWSWSAPRDGGRSECDIILDLRGGTPLFPAPEKREGYLRADPKS
PVAVADAVFAASQLVGTFEKPLYVKAEPLLCAHSRARQTGCTRCLDACPTGAITPNGDSV
AIDPMICAGCGACASLCPSGAITYDAPPTESLFLRIQTLAKAYLDAGGEAPRLLVVDAHG
AEMIRLAARFDRGLPAAVIPLEVEAFNTFGHAEILAARAAGFREVCLLPGPRADLDVQTR
ERELANAISADAARLLHAAEPEALCDALYEARTLPAAPETPQRPMGTRRQITRQAALALT
AADTELPLPEGAPYGAVVVDTDACTLCLSCVSLCPSGALGDNEDLPQLRFQEDACLQCGL
CANACPEDAITFAPRLNLAPSALDQIVLNEEEPFACIECGSLFGVKSTVERIMEKLAGNH
AMFASSEAAKMIQMCDDCRVNAQFHQKDSPFASKERPRVRTTEDYLSTRRDH
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcacccgatattgtgtgattgttccggttcccaaccgctcgattcagaggcg
ctcagcgcggccaccggcctgccctgttcgaaggtacattcacacctctgcacaaccgag
tcagaggccgctgcggccgcccttcaggacccggatgcaattttttgttgcgggcaggaa
agtcggtttttcaccgcccttgccgaggagctgggccaagatgcccccgccttcctggac
ctgcgagaccgtgccggatggtcccgtgacgccctgaaggcagccgatgtactacccaaa
atgtccgcattggtgtcagaggcccaattggacctgcgccctgccaaaagcgtcgatgtg
gtaagcgagggtctgtgcctcatcgtgggaactgcggacgcggcgctcccggcagcagaa
aaactgcaagacagtcttggcgtcaccgtcctgctgaccgatgctgcagaaccgcccctc
agccgaggctttgacacgatccgcggccagttgcgcagcgcgcaaggggcgcttggcggt
tttgagatcacggtagacgcgctgcaatcgcttgatgtgaccgggcgagaatggtcttgg
agcgcaccgcgtgacggcggccgttcagagtgcgacatcatcctcgatctgcgcggcggc
acgcccctgttccccgcgcctgaaaagcgcgaaggctatctgcgtgcagatcccaaatcg
cctgtggcggtggcggatgcggtgtttgccgcaagccagttggtgggcaccttcgaaaag
ccgctctatgtcaaagccgagccacttctctgtgcgcattcccgcgcccgccagaccggc
tgcacgcgctgtctcgatgcctgccccaccggtgccatcacccccaatggggacagcgtt
gccattgatccgatgatctgtgctggctgcggggcctgcgcctcgctctgcccctcgggc
gcgatcacctatgacgcgccacccaccgagagcctgttcctgcggatccagacccttgcc
aaagcctatctcgacgcggggggcgaagccccgcgcctgctggtcgttgatgcgcatgga
gccgagatgatccgcctcgcggcacggtttgatcgcggtctgcctgcagctgtcattcca
ctcgaagtcgaagccttcaacacttttggccatgccgaaattctcgcggcacgcgcagct
ggttttcgcgaagtgtgcctcttgcccggcccccgcgccgatctcgatgtgcaaacacgt
gaacgggagctggccaatgcaatctcggccgacgcggctcgcctgctgcacgccgccgaa
cccgaagccctctgcgatgcgctttatgaggcgcgcaccctgcccgccgcgccggagaca
ccacagcgccccatgggcacccgccgacagatcacccgtcaggcagccctggccttgacc
gcggctgacaccgagctgccgttgcccgagggcgcgccttatggtgccgtggttgtggac
actgacgcctgtacgctgtgcctgtcatgtgtttcgctatgcccctccggtgcgcttggc
gacaacgaagatctgccacagctgcgttttcaagaggacgcctgcctgcaatgcggtctc
tgtgccaatgcctgtccggaggatgcaatcacatttgcgccccgcctgaacctcgcccca
tcggcgctggatcaaatagtactgaacgaagaagagccctttgcctgcatcgaatgcggc
agcctctttggggtcaaatccacagtcgaacggatcatggagaagcttgcgggcaatcac
gcgatgtttgcgagctccgaggccgccaagatgatccagatgtgtgatgattgccgggta
aatgcgcagttccaccagaaggactcgccctttgcgagcaaggaacgcccgcgcgtccgc
accacggaagactatctcagcacgcgccgtgatcattaa
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