Ruegeria sp. TM1040: TM1040_0401
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Entry
TM1040_0401 CDS
T00359
Name
(GenBank) formate dehydrogenase alpha subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
sit
Ruegeria sp. TM1040
Pathway
sit00630
Glyoxylate and dicarboxylate metabolism
sit00680
Methane metabolism
sit01100
Metabolic pathways
sit01120
Microbial metabolism in diverse environments
sit01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
TM1040_0401
09102 Energy metabolism
00680 Methane metabolism
TM1040_0401
Enzymes [BR:
sit01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
TM1040_0401
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Motif
Other DBs
NCBI-ProteinID:
ABF63134
RoseoBase:
TM1040_0401
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Position
408686..411580
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AA seq
964 aa
AA seq
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MLRKKTNGVARRPQRTSILSKVGESAVDRRAFLRGSGLAIGGLAAISATGGTVTQANAAA
SATGAMETIKSVCTHCSVGCTVVAEVQNGVWVGQEPGWDSPFNLGAHCAKGASVREHAHG
ERRLKYPMKKEGGEWKRISWEQAIDEIGDGMMQIREESGPDSVYWLGSAKHNNEQAYLFR
KFAAYWGTNNVDHQARICHSTTVAGVANTWGYGAMTNSYNDIHKSKAIFIIGGNPAEAHP
VSLLHVLKAKEENNAPLIVCDPRFTRTAAHADEYVRFRPGTDVALVWGILWHIFENGWED
TEFIRTRVWGMDQIRTEVAKWTPEEVERVTGTPGSQLKRVARTLVNNRPGTVIWCMGGTQ
HTNGNNNTRAYCILQLALGNMGVSGGGTNIFRGHDNVQGATDLGVLSHTLPGYYGLSAGA
WGHWGRVWGEDMDWLKGQFETVKGADGKDKNLMNLTGIPVSRWIDGILEDKENMDQPNNV
RAMVLWGHAPNSQTRMTEMKTAMEKLDMLVVVDPYPTVSAVLHDRTDGVYLLPACTQFET
RGSVTASNRSLQWRDQVVEPLFESLPDHVIMAKFANKFGWADRLFRNIEMEDAETPNIES
ITREFNAGMWTVGYTGQSPERIKLHMANQHTFDRTTLQAVGGPADGDYYGMPWPCWGTPE
MKHPGTPNLYDMSKPVAEGGLCFRARFGVERDGENLLAEGVSNPGAEIQDGYPEFTMQML
MDLGWDGDLTAEERAAIDAVAGPKTNWKTDLSGGIQRVAIKHGCAPFGNAKARAVVWTFP
DPVPLHREPLYTNRRDLVADYPTYEDRKFYRLPTMYASIQKNDVSKEYPIILTSGRLVEY
EGGGDETRSNPWLAELQQDMFVEINPRDANDIGIRDGSQVWVEGPEGGKVKVMAMVTERV
GAGVAFMPFHFGGHFQGKDLRDKYPDGADPYVLGESTNTAQTYGYDSVTQMQETKATLCK
ISAA
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcttaggaaaaagaccaacggggttgcgcgacgcccccagcggaccagtatcctgtcc
aaggtcggtgagtcagccgtcgaccgccgcgcgttcctgcgcggatctggccttgccatc
ggcgggcttgctgccatcagcgcaaccggtggtacagtgacgcaagccaatgcggcggcg
tctgcaaccggcgcgatggaaacgatcaaatccgtctgcacccactgctcggtcggctgt
accgtggtggcagaggtgcaaaacggtgtctgggttggccaggagccaggctgggacagc
cccttcaacctcggtgcgcattgcgccaagggcgcttcggtgcgtgaacacgctcatggt
gagcgccgcctgaagtacccgatgaagaaagaaggcggtgagtggaagcgcatcagctgg
gagcaggccatcgacgagatcggcgacggcatgatgcagatccgcgaagaaagcggccct
gatagcgtctactggctcggttctgccaagcacaacaacgaacaggcctacctgttccgc
aagttcgccgcctactggggtacgaacaacgtggatcaccaggcccggatctgtcactcc
accacggttgcgggtgttgcgaatacatggggctacggcgccatgaccaacagctacaac
gacatccataaatccaaggcgatctttatcatcggtggcaaccccgccgaggcgcatccg
gtatcgctgctgcatgtgctgaaggccaaggaagagaacaacgcgccgctgatcgtctgc
gatccgcgtttcacgcgtacggcggcccatgcggatgaatatgtccgcttccgtcccggc
accgacgtggcgctcgtttggggcatcctgtggcatatctttgaaaacggttgggaagac
accgagttcatccgcacccgtgtctggggtatggatcagatccggaccgaagtggccaaa
tggacgcccgaagaggtcgaacgcgtcaccggcaccccgggtagccagctcaagcgcgtt
gcgcgcaccctggtcaacaaccgccccggcaccgtcatctggtgtatgggtggcacccag
cacaccaatggcaacaacaacacccgcgcctactgcatcctgcagctggcccttggcaac
atgggtgtgtccggcggtggcaccaacatcttccgcggccacgacaacgtgcagggggca
accgaccttggcgttctgagccacactctgccgggctattatggtctgtcggctggcgca
tggggccattggggccgcgtctggggcgaagacatggactggctgaagggtcagtttgaa
accgtcaaaggcgccgacggcaaggataagaacctgatgaacctgacgggcattccggtg
tcccgctggatcgacggtatccttgaagacaaggaaaacatggaccagcccaacaatgtt
cgggccatggttctctggggccacgcgccgaactctcagacccggatgacggagatgaag
acggcgatggagaaactcgacatgcttgtcgtggttgacccctatccgaccgtctctgcc
gtgctgcatgatcgcaccgatggtgtctatctgctgcccgcctgcacccagtttgagacc
cgcggctccgtgacggcctcgaaccgttcgctgcagtggcgcgatcaggtggtggagcct
ctctttgagagtctgccggatcacgtcatcatggccaaattcgccaataagttcggctgg
gcagatcgtctcttccgcaatatcgaaatggaagacgccgagacccccaacatcgaaagc
atcacccgtgagttcaatgcgggcatgtggacagtgggctacacgggtcagagcccggag
cgcatcaagctccatatggccaatcagcacacctttgatcgcacgacgcttcaggccgtt
ggtggcccggcggatggcgattactacgggatgccatggccctgctggggcacgccggaa
atgaagcatccgggcacgccgaacctctatgacatgtccaaacctgtcgccgaaggtggt
ctgtgtttccgcgcccgtttcggggtggagcgtgatggcgaaaatctcctggcagaaggg
gtctccaaccccggtgcggagattcaggatggctatcctgagttcaccatgcagatgctg
atggatctgggctgggatggcgacctgacggccgaggaacgcgcggcgatcgacgccgtt
gccgggccaaagaccaactggaaaaccgacctctccggtgggattcagcgggttgcgatc
aagcacggctgcgcgcccttcgggaacgccaaggctcgtgcggttgtgtggaccttcccg
gatccggtgccgctgcaccgcgagccgctctacaccaaccggcgtgacctggtggcggat
tatccgacctatgaggatcggaaattctatcgtctgcccaccatgtatgcctcgatccag
aagaacgatgtctccaaggagtatccgatcatcctcacctccggccgtctggtcgaatat
gagggcggcggtgacgagacccgttcgaacccgtggcttgcagaactgcagcaggacatg
ttcgtcgagatcaatccgcgcgatgccaatgacatcggaatccgcgatgggtctcaggtc
tgggtcgaaggcccggaaggcggcaaggtcaaggtgatggcaatggtgacagaacgcgtc
ggggccggtgtggccttcatgccgttccactttggcgggcacttccaaggtaaggatctg
agggataaatatcccgacggggccgacccttacgtgctgggtgaaagtaccaacaccgcg
cagacctacggctatgactctgtcacgcagatgcaagagaccaaagccaccctctgcaaa
atctcagcagcctaa
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