Ruegeria sp. TM1040: TM1040_0402
Help
Entry
TM1040_0402 CDS
T00359
Name
(GenBank) 4Fe-4S ferredoxin iron-sulfur binding
KO
K00124
formate dehydrogenase iron-sulfur subunit
Organism
sit
Ruegeria sp. TM1040
Pathway
sit00630
Glyoxylate and dicarboxylate metabolism
sit00680
Methane metabolism
sit01100
Metabolic pathways
sit01120
Microbial metabolism in diverse environments
sit01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
TM1040_0402
09102 Energy metabolism
00680 Methane metabolism
TM1040_0402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer4_7
Fer4_11
Fer4
Fer4_9
Fer4_6
Fer4_10
Fer4_2
Fer4_21
Fer4_16
Fer4_4
Fer4_8
Fer4_3
Motif
Other DBs
NCBI-ProteinID:
ABF63135
RoseoBase:
TM1040_0402
LinkDB
All DBs
Position
411594..412187
Genome browser
AA seq
197 aa
AA seq
DB search
MSRAKFLCDAERCIECNACVTACKNEHEVPWGINRRRVVTINDGKPGERSISVACMHCSD
APCMAVCPVDCFYQTEDGVVLHSKDLCIGCGYCFYACPFGAPQFPQAGNFGSRGKMDKCT
FCAGGPEENNSQAEFQKYGRNRIAEGKLPICAEMCSTKALLAGDGDTVSSIYRERVVARG
FGSGAWGWGTAYDQKGG
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagagcaaagttcctctgtgacgccgaacgctgcatcgagtgcaacgcctgtgtc
accgcttgtaagaacgagcatgaagtcccctggggcatcaaccgtcgccgtgttgtgacc
atcaacgatggtaagcccggcgaacgctcgatctcggtcgcctgcatgcattgttccgat
gctccctgcatggcggtctgtccggtagactgtttctaccagaccgaggatggggtggtt
ctccactccaaggacctctgcatcggctgtgggtactgcttctatgcatgtccctttggc
gcgccgcagttcccgcaggcgggtaacttcggatctcgtggcaagatggacaaatgtacc
ttctgtgcaggcggtcccgaggagaacaactctcaggcggagttccagaaatacgggcgc
aaccggattgcagaaggcaagttgccgatctgcgccgagatgtgctccaccaaggcgctt
cttgcgggcgatggcgataccgtttcgtcgatctaccgcgagcgcgtggtggcccgtggc
tttggttccggcgcctggggttggggcacggcctacgatcagaaaggcggctaa
DBGET
integrated database retrieval system
