Ruegeria sp. TM1040: TM1040_0404
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Entry
TM1040_0404 CDS
T00359
Name
(GenBank) cytochrome c class I
KO
K08738
cytochrome c
Organism
sit
Ruegeria sp. TM1040
Pathway
sit00190
Oxidative phosphorylation
sit01100
Metabolic pathways
sit02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
TM1040_0404
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
TM1040_0404
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
Cytochrom_C
DUF6274
Cytochrom_D1
Cytochrome_CBB3
Motif
Other DBs
NCBI-ProteinID:
ABF63137
RoseoBase:
TM1040_0404
UniProt:
Q1GJM9
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Position
413522..414805
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AA seq
427 aa
AA seq
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MLRRLALGLLLCAASGVSAEEFQTLKGHGGPIMALAVNDRGHVASASFDNSVSLWQEGAP
SWLEAHEAAATVVAFGPDDTLFSAGDDFVIYRWQQGHPQEIGRHTAKIRALDLSRDGEWL
ASASWDGGIGLWPMSAGTPRRIAVGTGVNDLAFDGAGRLFVATMTGQIQVFDSPEAAPRI
LAEQGFGINRLVLSAAGWLAYGAVDGGTRVINAETGAEIADFTLDRRPILALAHHAESQQ
IAVGDGHGYIMMIDTHDWSIARDFRAMREGPVWALAFSKDGQRVWAGGIHDVIYGWPIAL
MASSPAAGTETRTFLQAPETMPNGERQFMRKCSVCHDLVATEQRRAGPHLAGLFGRPAGS
LPGYRYSDTLAQSDIIWGAETIDALFDLGPDHYIPGSKMPMQRITAPTDRQDLIDYLKTA
TQLSEDN
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggcgactggctcttggcctgctcctctgcgccgcctctggggtgagcgcggag
gagttccagaccctcaaaggacacggagggccgatcatggcgcttgccgtgaacgatcgg
gggcacgtggccagcgccagtttcgacaattccgtctcactctggcaggagggggcgccg
agctggctcgaggcacatgaagcagccgcgaccgtggtggcctttggccctgatgatacc
ctgttcagcgcaggcgacgactttgtgatttatcgctggcagcagggccacccccaagag
atcggacggcataccgccaagatccgcgccttggacctctcgcgcgatggggaatggctc
gcctccgcaagctgggatggcggcattggtctttggcctatgagtgcgggcacgccccgc
cgcatcgcggttggaacgggcgtgaacgatcttgcctttgacggggccggtcgcctcttc
gtcgccaccatgaccgggcagatccaagtcttcgacagcccggaggctgccccacgaatt
ctggcggaacaagggtttggcatcaaccgtttggtgctctctgctgctggctggctggcc
tatggcgccgttgatggcggcacccgtgtgatcaacgcagaaaccggggccgagattgcc
gatttcaccctcgaccggcggcccatactggcccttgcgcatcatgccgagagccagcag
atcgccgtgggtgatgggcatggctatatcatgatgatcgacacacacgactggagcatt
gcgcgcgattttcgggccatgcgcgaaggccccgtctgggctctggcgttttcaaaggac
ggccagcgggtctgggcaggcggcatacacgatgtgatctatggctggcccatcgcgctg
atggccagcagcccagcggcgggaaccgagacccgcacattcctgcaggcgcctgaaacc
atgcccaatggtgagcgccaattcatgcgaaaatgctcggtttgccacgatttggtcgcc
acagagcagcggcgcgccggtcctcatctggcggggctctttggacgaccggccggcagt
ctgcctggctatcggtattccgacacgctggcgcagtctgacatcatctggggtgccgag
accatcgatgccctgttcgatctcggccctgaccattatattccggggtccaagatgccg
atgcagcgcatcaccgcccccacagatcgccaagatctgatagactatctgaaaaccgcg
acacaactttcggaggataattga
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