KEGG   Ruegeria sp. TM1040: TM1040_0404
Entry
TM1040_0404       CDS       T00359                                 
Name
(GenBank) cytochrome c class I
  KO
K08738  cytochrome c
Organism
sit  Ruegeria sp. TM1040
Pathway
sit00190  Oxidative phosphorylation
sit01100  Metabolic pathways
sit02020  Two-component system
Brite
KEGG Orthology (KO) [BR:sit00001]
 09100 Metabolism
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    TM1040_0404
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    TM1040_0404
SSDB
Motif
Pfam: WD40 Beta-prop_IFT122_1st Beta-prop_THOC3 Beta-prop_WDR5 WD40_WDHD1_1st Beta-prop_WDR3_1st Beta-prop_WDR3_2nd WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Cytochrom_C EIF3I Beta-prop_VPS8 Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_Vps41 WD40_Gbeta Beta-prop_IFT140_1st CFAP251_N Beta-prop_RIG_2nd Cytochrom_D1 DUF6274 Cytochrome_CBB3 ADH_N Beta-prop_ACSF4 Tricorn_N PEP5_VPS11_N
Other DBs
NCBI-ProteinID: ABF63137
RoseoBase: TM1040_0404
LinkDB
Position
413522..414805
AA seq 427 aa
MLRRLALGLLLCAASGVSAEEFQTLKGHGGPIMALAVNDRGHVASASFDNSVSLWQEGAP
SWLEAHEAAATVVAFGPDDTLFSAGDDFVIYRWQQGHPQEIGRHTAKIRALDLSRDGEWL
ASASWDGGIGLWPMSAGTPRRIAVGTGVNDLAFDGAGRLFVATMTGQIQVFDSPEAAPRI
LAEQGFGINRLVLSAAGWLAYGAVDGGTRVINAETGAEIADFTLDRRPILALAHHAESQQ
IAVGDGHGYIMMIDTHDWSIARDFRAMREGPVWALAFSKDGQRVWAGGIHDVIYGWPIAL
MASSPAAGTETRTFLQAPETMPNGERQFMRKCSVCHDLVATEQRRAGPHLAGLFGRPAGS
LPGYRYSDTLAQSDIIWGAETIDALFDLGPDHYIPGSKMPMQRITAPTDRQDLIDYLKTA
TQLSEDN
NT seq 1284 nt   +upstreamnt  +downstreamnt
atgctgcggcgactggctcttggcctgctcctctgcgccgcctctggggtgagcgcggag
gagttccagaccctcaaaggacacggagggccgatcatggcgcttgccgtgaacgatcgg
gggcacgtggccagcgccagtttcgacaattccgtctcactctggcaggagggggcgccg
agctggctcgaggcacatgaagcagccgcgaccgtggtggcctttggccctgatgatacc
ctgttcagcgcaggcgacgactttgtgatttatcgctggcagcagggccacccccaagag
atcggacggcataccgccaagatccgcgccttggacctctcgcgcgatggggaatggctc
gcctccgcaagctgggatggcggcattggtctttggcctatgagtgcgggcacgccccgc
cgcatcgcggttggaacgggcgtgaacgatcttgcctttgacggggccggtcgcctcttc
gtcgccaccatgaccgggcagatccaagtcttcgacagcccggaggctgccccacgaatt
ctggcggaacaagggtttggcatcaaccgtttggtgctctctgctgctggctggctggcc
tatggcgccgttgatggcggcacccgtgtgatcaacgcagaaaccggggccgagattgcc
gatttcaccctcgaccggcggcccatactggcccttgcgcatcatgccgagagccagcag
atcgccgtgggtgatgggcatggctatatcatgatgatcgacacacacgactggagcatt
gcgcgcgattttcgggccatgcgcgaaggccccgtctgggctctggcgttttcaaaggac
ggccagcgggtctgggcaggcggcatacacgatgtgatctatggctggcccatcgcgctg
atggccagcagcccagcggcgggaaccgagacccgcacattcctgcaggcgcctgaaacc
atgcccaatggtgagcgccaattcatgcgaaaatgctcggtttgccacgatttggtcgcc
acagagcagcggcgcgccggtcctcatctggcggggctctttggacgaccggccggcagt
ctgcctggctatcggtattccgacacgctggcgcagtctgacatcatctggggtgccgag
accatcgatgccctgttcgatctcggccctgaccattatattccggggtccaagatgccg
atgcagcgcatcaccgcccccacagatcgccaagatctgatagactatctgaaaaccgcg
acacaactttcggaggataattga

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