Ruegeria sp. TM1040: TM1040_0456
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Entry
TM1040_0456 CDS
T00359
Name
(GenBank) RNA polymerase, sigma 32 subunit, RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
sit
Ruegeria sp. TM1040
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sit03021
]
TM1040_0456
Transcription machinery [BR:
sit03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TM1040_0456
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
ABF63189
RoseoBase:
TM1040_0456
UniProt:
Q1GJH7
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Position
473334..474212
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AA seq
292 aa
AA seq
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MALDETTKNPLPKQAMKAELLDAETELALAYAWRDEKDVQALHRLITAYMRLAVSMASKF
RRYGAPMNDLIQEAGLGLMKAAEKFDPDRGVRFSTYAVWWIKASIQDYVMRNWSMVRTGS
TSSQKSLFFNMRRVQAQLEREAAGEGVELDRHKLMQMVAEEIGVPLRDVEMMDGRLAGAD
FSLNAVQSADEDGREWIDALEDDSEQAADRVEADHDRRQLREWLLSALNGLNERERFIVR
ERKLREEARTLESLGNELGLSKERVRQLEAAAFSKMRKSLEGQSREVQNFLA
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggcactggacgagaccaccaagaaccccctcccgaagcaggccatgaaagccgagctt
ctggatgcagagacggaattggcgttggcctacgcatggcgcgatgagaaggacgtgcag
gcgctccatcgtctgatcacagcctacatgcggctcgcagtgtcgatggcgtcaaaattc
cgccgctatggcgccccgatgaatgatctcatccaagaggcagggcttggcctgatgaag
gcggcagagaaatttgatcccgaccgcggcgtgcggttctcgacctacgcggtctggtgg
atcaaggcgtccattcaggactacgtgatgcgcaactggtcgatggtgcgcactggctcg
acctcctcgcagaagtccctgttcttcaacatgcgccgtgtgcaggcgcaactcgagcgc
gaggcagccggcgaaggcgtggaactcgaccgtcacaagctgatgcagatggttgcagaa
gagatcggcgtgccgctgcgcgatgtcgagatgatggacggccgcctcgcgggtgctgat
ttctcgctgaacgcagtgcagtcggcagacgaggacgggcgcgagtggatcgacgccttg
gaagatgacagcgaacaggctgcggaccgcgtggaggccgatcatgatcgtcgccagctg
cgcgagtggctgctctcggcgctgaatggtctcaatgagcgcgagcgctttatcgtgcgc
gagcgcaaactgagagaagaggcgcgcactctggagagcctcggcaatgaattgggactg
tcaaaagagcgcgtgcgtcagctggaagccgccgccttctcaaagatgagaaagagcctt
gaaggtcagtcccgtgaggtgcagaacttccttgcatga
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