Ruegeria sp. TM1040: TM1040_0477
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Entry
TM1040_0477 CDS
T00359
Name
(GenBank) isocitrate dehydrogenase NADP-dependent
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
sit
Ruegeria sp. TM1040
Pathway
sit00020
Citrate cycle (TCA cycle)
sit00480
Glutathione metabolism
sit00720
Other carbon fixation pathways
sit01100
Metabolic pathways
sit01110
Biosynthesis of secondary metabolites
sit01120
Microbial metabolism in diverse environments
sit01200
Carbon metabolism
sit01210
2-Oxocarboxylic acid metabolism
sit01230
Biosynthesis of amino acids
sit04146
Peroxisome
Module
sit_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sit_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
TM1040_0477
09102 Energy metabolism
00720 Other carbon fixation pathways
TM1040_0477
09106 Metabolism of other amino acids
00480 Glutathione metabolism
TM1040_0477
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
TM1040_0477
Enzymes [BR:
sit01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
TM1040_0477
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GFIT
Motif
Pfam:
IDH
FMN_red
Motif
Other DBs
NCBI-ProteinID:
ABF63210
RoseoBase:
TM1040_0477
UniProt:
Q1GJF6
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All DBs
Position
complement(497149..499365)
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AA seq
738 aa
AA seq
DB search
MAENSTPDILYTIVDEAPELASASFLPIIRKFADAAGVSVGTKDISLAARIIATFPENLT
EEQRQSDDLAALGELVKTPDANVIKLPNISASVPQLVAAIEELQAQGYKLPDYPYEPATD
AEKEIRARYDTIKGSAVNPVLREGNSDRRSAKAVKNYAQNNPHSMGAWSGDSKTKVSSMP
GNDFYANEKSATISAEQAGDAKIEFVAKDGSVTVLKDGWPLAEGTVADATFMSAKALAAF
LSGAIEDTKADGTMFSLHMKATMMKVSDPIIFGHAVKAWLGPVWDKHGAAIAAAGGSPNS
GLGAVLAAIDSLPNADEIKSEIAALERPSMYMVDSDKGITNLHVPSDVIIDASMPAVIRA
GGKGWDETGAKGDTNCVIPDRCYSTVYDETINFFKANGALDVTTAGSVANVGLMAQKAEE
YGSHPTTFEAPADGEIRVILANGETLHSHEVEAGDIWRACTVKKAPIENWIQLALDRQRL
TGSEAIFWLDANRAHDAELIKYVKPALDAAGVADKFLIMAPREATRQSLETITAGKDSIA
ITGNVLRDYLTDLFPILELGTSAKMLSIVKLMNGGGLFETGAGGSAPKHVQQLVEENHLR
WDSMGEFCALGESLKFLADVKGNEKAGVLGAAAEVATQGILDNNKSPERKVGQPDNRDSH
YWFARYWAEALAAQGDDAELAAHFKPIAEALASNEAAILSELAAAQGGAADIGGYYHPSV
EKKAAVMRPSATLNGIIG
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaattcaacgccggacattttgtataccattgtagacgaagcgcccgagctg
gcctcggcatctttcctgccgatcatccgcaaatttgcggatgctgccggtgtcagcgtt
ggcacaaaggacatttcgctggccgcacgcattatcgcgaccttcccggagaacctcacc
gaagagcagcgccaaagcgatgacctcgccgcgctgggcgagctggtgaagacccccgac
gcaaatgtcatcaaactgcccaacatctctgcatccgtgccccagctggtggccgcgatc
gaggaactgcaggcgcaggggtacaagctgcccgactacccctacgagcccgcaaccgac
gcggaaaaggaaatccgcgcccgctacgacaccatcaagggctccgcggtgaacccagtc
ctgcgcgaaggcaactcggaccgtcgttcggccaaagccgtgaagaactacgctcagaac
aacccgcattcgatgggcgcatggtctggcgacagcaagaccaaagtctcgtcgatgccc
ggcaacgacttttatgccaacgagaaatccgccaccatttccgccgagcaggccggtgac
gcgaagatcgaatttgtcgcaaaagacgggtccgtcaccgttctgaaagacggctggccg
ctggcagaaggcacggttgccgatgcgaccttcatgtccgccaaagcgctcgccgcgttc
ctgtctggcgcgatcgaggataccaaggcggacggcaccatgttctcgctgcacatgaag
gccaccatgatgaaggtctccgacccgatcatctttggccacgcggtcaaagcctggctc
ggccctgtgtgggataaacacggcgccgcaattgctgccgcaggtgggtcgccgaactcc
ggtctgggtgcggttctggccgccatcgacagcctgcccaacgcagatgagatcaaatcc
gagatcgccgcgctcgaacgcccctccatgtatatggtggacagcgacaagggtatcacc
aacctgcatgtgccctccgacgtgatcatcgatgcctccatgccggccgtgatccgtgct
ggcggtaagggctgggacgagaccggcgccaagggcgacaccaactgcgtgatccccgac
cgctgctactccaccgtctatgacgagaccatcaacttcttcaaagccaatggcgcgctc
gacgtgaccactgccggttcggtcgcaaacgtcggcttgatggcgcaaaaggcggaagag
tatggctcgcacccgacgaccttcgaagccccggcagacggcgagatccgcgttattctg
gccaatggcgagaccctgcacagccacgaagtcgaggccggcgacatctggcgcgcctgc
accgtgaaaaaggctccaatcgagaactggattcaactggctttggaccgtcagcgcctg
accgggtccgaggcgatcttctggctggacgcaaaccgcgcccatgacgcagagctgatc
aaatacgtcaaacccgcgcttgatgcggctggcgtcgccgacaagttcctgatcatggcg
ccgcgcgaagccacccgtcagagcctcgagaccatcactgcgggcaaggacagcatcgcc
atcaccggcaacgtgctgcgcgactacctgaccgacctgttcccgatcctcgagcttggc
acctcggccaagatgctgtcgattgtgaagctgatgaacggcggcggcttgtttgagacc
ggcgcaggcggttccgcgcccaaacacgtgcagcaactggttgaggaaaaccacctgcgt
tgggactccatgggtgagttctgcgctctgggcgaaagcctgaagttcctcgccgatgtc
aaaggcaacgagaaggcaggcgtgcttggcgcagctgccgaggttgcgacccaaggcatc
ctcgacaacaacaaatcgcccgagcgcaaagtcggccagcccgacaaccgcgacagccac
tactggtttgcccgctactgggcagaagccctcgcggcacagggtgatgacgcggagctg
gccgcgcatttcaaaccgattgccgaggctcttgcctccaacgaagcggcgattctgtct
gaactcgccgccgctcagggaggcgcagccgacatcggtggctattaccacccctccgtt
gaaaagaaggccgccgtcatgcgcccctctgcaaccctcaacggcatcatcggctga
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