KEGG   Ruegeria sp. TM1040: TM1040_0528
Entry
TM1040_0528       CDS       T00359                                 
Name
(GenBank) Type I secretion membrane fusion protein HlyD
  KO
K12542  membrane fusion protein, adhesin transport system
Organism
sit  Ruegeria sp. TM1040
Brite
KEGG Orthology (KO) [BR:sit00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:sit02000]
    TM1040_0528
   02044 Secretion system [BR:sit02044]
    TM1040_0528
Transporters [BR:sit02000]
 Other transporters
  Accessory factors involved in transport [TC:8]
   TM1040_0528
Secretion system [BR:sit02044]
 Type I secretion system
  Adhesin protein transporter
   TM1040_0528
SSDB
Motif
Pfam: Beta-barrel_AprE HH_AprE BSH_CusB BSH_RND BSH_CzcB BSH_YknX Biotin_lipoyl Peptidase_M23 Beta-barrel_YknX BSH_LcnD TmoB
Other DBs
NCBI-ProteinID: ABF63261
RoseoBase: TM1040_0528
LinkDB
Position
complement(554564..555736)
AA seq 390 aa
MSIAADMDILEGTHGASRMIKLVALVLVMFVTWAGFASVDEIVRADGQVVSSSRAQIVQN
LEGGILAELYVRQGDTVQAGQILAKLQDTKFRAASDDLQDQIDALEIKQYRLEAEIEGAY
EFAVPDALASRSPDILASERALLKARQSDFDSRRNSAEDILRQLKNELSNLQSLHEQKIV
ALLEVNEAKKKVSDAQAKFDEIGTQAELTLAEEYSDTLRELTSLRQEQRLARDQLDRTVI
TSPMAGIVNSLAVTTIGGVVRPGDEILEIIPLGEELFVEARVKPEDIANVQRGQDVTIKL
TAYDYTIYGSLRGKVDIVSADTFEDERDPRAAPFYRVTVRVDRSSLTARQKQIEIRPGMR
ATAELQTGSKTILSYLLKPLYKSREAFREP
NT seq 1173 nt   +upstreamnt  +downstreamnt
atgagcatcgcagcagacatggacatccttgaaggcacccatggcgccagccgcatgatc
aagctggtggcgctggtgctcgttatgtttgtcacctgggccggtttcgcctcggtggac
gagatcgtgcgcgccgacggacaggttgtctcctcctcgcgggcgcaaatcgtacagaac
ctcgaaggcggcatccttgcggaactctatgtgcgtcagggcgataccgtgcaggccggg
cagatcctcgccaagctgcaggataccaaatttcgggcagcctcagacgaccttcaagac
cagattgatgcgcttgagatcaagcaataccgcctcgaggcggagatcgagggagcctat
gagtttgccgtccctgacgcactggcaagccgttcaccggacatccttgcctcggaacgc
gcgctgctcaaggcgcgtcagagcgactttgacagccgccgcaacagcgccgaggacatc
ctgcggcagctgaagaacgagctttccaacctgcagtccctgcacgaacagaagattgtc
gcactgcttgaggtgaacgaggccaagaaaaaggtgagcgacgcgcaggccaaattcgac
gagatcggtacccaggccgaattgacgctcgccgaagaatattccgacaccctgcgcgag
ctgacttcgctgcgtcaggaacagcggcttgcgcgtgaccagcttgaccggacggtcatc
acctcgcccatggcggggatcgtcaacagcctcgccgtgaccacaatcggtggcgtggtg
cgccccggtgatgagatcctcgagatcattcctttgggcgaagagctctttgtcgaagcc
cgtgtcaaacccgaagacatcgccaatgtgcagcgcgggcaggatgtgaccatcaagctc
accgcctatgactacacgatttatggttcgctccggggcaaggtggacatcgtgtccgcc
gatacctttgaggatgagcgcgacccccgcgcggccccgttttaccgggtcaccgtgcgc
gtagaccgctccagcctgaccgcgcgccagaaacaaatcgaaatccgcccaggcatgcgc
gccacggcagagctgcaaaccggatcaaagacgatcctcagttacctgttgaaaccgctc
tataaatcacgcgaagccttccgggagccatag

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