Ruegeria sp. TM1040: TM1040_0529
Help
Entry
TM1040_0529 CDS
T00359
Name
(GenBank) ABC transporter related
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
sit
Ruegeria sp. TM1040
Pathway
sit02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
TM1040_0529
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sit02000
]
TM1040_0529
02044 Secretion system [BR:
sit02044
]
TM1040_0529
Transporters [BR:
sit02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
TM1040_0529
Secretion system [BR:
sit02044
]
Type I secretion system
Adhesin protein transporter
TM1040_0529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
AAA_29
DUF6394
SRP54
DUF87
AAA_28
NACHT
AAA_23
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ABF63262
RoseoBase:
TM1040_0529
UniProt:
Q1GJA4
LinkDB
All DBs
Position
complement(555733..558348)
Genome browser
AA seq
871 aa
AA seq
DB search
MTDQDSHTPAPPASKPAKRGLKLSSITPNLTRKRRGDAANQTEGPVKISMVAPTANPKPA
NAEAKLDARLSVPKFLQRKAKPAAAETPAAPQTQAPPAVDPIEIESFVAPRPAATKPDAA
PATEPLATFEPEEDPQNAEAADQDQMRPEPAPQTARETEAASASMVAAEDTLGRLKARAQ
LLCRLAALRGCTLHAQDMLEHLQASGPAALRPEAMMSALITAGLKARVQSVKRPTPRHWP
GIAIMQGGQPVLVLSQGKAGVTIYDSSCPDGRAEVPMQEFMPYYAGQILTTRATLSQLTQ
RHTPQLDTSHWFWGEFPKYRRQMGEIMLGSLVANVLAVAVALFSLQVYDRVVPHQSQATL
WVLAVGALMAIGMEGILKLARARITDAAGRQIDMAVQHKLMRRVIGLKMDQSPLPPSGLF
AALRDFASVREFFTSSTLSTLADVPFIAVFLLLVASIGGPVVYVILIGAVLMLLPAYFIQ
KKMLAMTRLAQGASTKSGRLLNEVVNEMETIKTQRGEERVLRLWDELNLLSSQASNGQRK
LASALTYWSQGVQQATYICAVILGTYMVFAGEFTVGTIIATGILTSRTLAPLTQFAGTLA
RWSNVRAALDALDMIADAPQEREKGRAYLRRESIEGRFELREVVFRYDPDAAPTVDVPAV
AVLPGQRVAILGVNGSGKSTLLKLLAGLYTPERGRVMLDGTDMSQIEPRDLRRHIGYLGQ
EVRLFAGTLRDNLNLSYLPHEDERIMEALEFAGLAAFVRGHPRGLDLEIGDGGAGLSIGQ
RQAVGWARLHLQNPSVVLLDEPTAALDQTLERTLVSRLDSWLGTRTAIVATHRMPILSLT
NRTLILQAGRMVVDGPRDEVLAHLNGGSKAS
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
ttgacggatcaggactcgcatacgcccgcaccccccgcctccaagcccgcaaaacgtggg
ctgaagctgtcttcgatcacgcccaacctgacccgcaaacgacgcggagacgctgcgaac
cagaccgaggggccggtcaagatctccatggtcgcgccgacagcgaacccaaagcccgca
aacgccgaagccaagttggatgcgcggctctctgtccctaagtttctgcaacgcaaagca
aagcccgcagcagccgagacacccgccgccccccaaacgcaagccccccctgccgtagat
ccaattgagatcgaatccttcgtggcgccccgccctgccgcaacaaagccggacgccgcg
ccggcaacagagccactggccactttcgaacccgaagaggatccacagaacgccgaagca
gcggatcaagaccagatgcgcccggagcccgcgccgcaaacggctcgcgagaccgaagct
gcctctgcgtccatggtcgcggcggaagacacgttgggacgcctcaaagcacgggcacag
ctgctctgtcgccttgcagctttgcggggctgcacgcttcacgcacaggatatgctcgag
catcttcaggccagcggtcccgcagccctgcgccccgaagccatgatgagcgcgctgatc
accgctggcctcaaggcccgcgtgcaaagcgtgaaacgccccacaccccggcactggccg
ggcatcgccatcatgcagggcggacagcccgttctggtgctctctcagggcaaggctggc
gttaccatttacgacagctcctgccccgatgggcgcgccgaagtgccaatgcaggagttc
atgccctattatgcgggccagatcctcacgacacgcgcgaccctgtcgcaactgacgcag
cgccatacgcctcagctggatacctcgcattggttctggggagaattccccaagtatcgc
agacagatgggcgagatcatgctgggctctctggttgccaatgtactcgcggttgcggtg
gcattgttctccctccaggtctatgaccgcgtggtgccccatcagtcgcaggcgaccctc
tgggtgctcgccgtcggggctctcatggcgatcgggatggaaggcatcctgaagctggca
cgtgcccggatcaccgatgcggcaggccgccaaatcgatatggccgtgcagcacaagctg
atgcgtcgggtgatcggcctcaagatggatcagagccccctgcccccgtcgggtctcttt
gcagcgctgcgagattttgcctcggtgcgcgagttctttacttcctcaaccctgtcgacc
ctggccgacgtgcccttcatcgcggtgttcctcttgctggtcgcctcgattggtgggccg
gtcgtctatgtcatcctgatcggcgccgtcctgatgctgttgcccgcctacttcatccag
aaaaagatgctggcgatgacacgactggcgcaaggtgcctccaccaagagcgggcggctg
ctgaatgaggtggtcaatgagatggagaccatcaagacccaacgtggcgaggaacgtgtt
ctgcggctctgggatgagctgaacctcctgtcctctcaggcctccaacggccagcgcaaa
ctcgcaagtgcgctcacctactggtcgcagggggtgcagcaggcaacctatatttgtgct
gtaattctggggacttatatggtgttcgccggtgagttcacggtcggcaccatcatcgca
acaggtatcctgacaagccgcacactcgctccgctcacgcagtttgcaggcacgctggcg
cgctggagcaatgtgcgtgcggcgctggatgcgcttgatatgatcgcagacgccccgcag
gagcgcgaaaagggccgcgcctacctgcgccgcgagagcatcgaaggccgttttgagctg
cgcgaagtcgtatttcgctatgaccctgatgcagcgccgacagtagatgttccagcggtt
gcggtgctccccggtcagcgcgttgccattcttggcgtcaacgggtccgggaaatcgacg
ctcctgaagctgctcgccgggctttacacccccgaacgtgggcgcgtgatgctggacggc
accgatatgagccagatcgagccgcgcgacctgcggcgccacatcggctatctcggccag
gaggtgcgcctctttgcaggcacgctgcgcgacaacctgaacctctcctatctgcctcat
gaagacgagcgaatcatggaggcgcttgagtttgcagggcttgcggcattcgtgcgggga
cacccgcgcgggctcgaccttgaaatcggtgacggaggcgcgggcctgtcaatcggtcag
cgtcaagctgtgggatgggcgcgcctgcacttgcagaacccgtcggtcgtgcttttggac
gaacccaccgcggcgctcgatcagacgcttgaacgcacgctggtgagccgtctggacagc
tggctcgggacgcgcactgccattgttgcaacgcaccgtatgccgatcctgtcgctcacc
aaccgcaccttgatcctgcaggccgggcgcatggttgtggacgggccacgcgacgaggtg
ttggcgcatctgaacggggggagcaaagcctcatga
DBGET
integrated database retrieval system
