Ruegeria sp. TM1040: TM1040_0557
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Entry
TM1040_0557 CDS
T00359
Name
(GenBank) protocatechuate 3,4-dioxygenase, alpha subunit
KO
K00448
protocatechuate 3,4-dioxygenase, alpha subunit [EC:
1.13.11.3
]
Organism
sit
Ruegeria sp. TM1040
Pathway
sit00362
Benzoate degradation
sit01100
Metabolic pathways
sit01120
Microbial metabolism in diverse environments
sit01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
TM1040_0557
00624 Polycyclic aromatic hydrocarbon degradation
TM1040_0557
Enzymes [BR:
sit01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
TM1040_0557
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Motif
Pfam:
Dioxygenase_C
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
ABF63290
RoseoBase:
TM1040_0557
UniProt:
Q1GJ76
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Position
complement(594515..595132)
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AA seq
205 aa
AA seq
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MVQPLTHLKESPSQTAGPYVHIGCTPNFADIAGVYPEDLGQKMILGDVKGQRIRITGHVI
DGTGTPLRDALVEIWQPDAAGLFNAPSETRGAADPNFTGFGRCPSDMTTGAFAFDTVKPG
AVPFVDGRMQAPHVTFWIVARGINLGLHTRMYFPDEADANVADPILTRIEHQTRVKTLIA
EAQGDGQYHFDIRLQGHNETVFFDI
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atggtacaacctctgacgcacctcaaggaatccccgtctcagacggctggcccctatgta
catattggctgtacaccgaattttgctgacatcgccggggtctatcccgaggacctcggt
caaaagatgatcctcggcgatgtcaaaggtcagcgcatccgcatcaccggccatgtcatc
gatggcaccggcacgcccctgcgcgacgcgcttgtcgagatctggcagccggatgcggcc
ggtctgttcaatgccccaagcgagacacgcggcgcggcagatccgaatttcaccggcttt
gggcgctgcccgtctgacatgaccaccggcgccttcgcctttgacacagtaaagcccggc
gcggtgccctttgtggacgggcgcatgcaggccccgcatgtgaccttctggatcgtcgcg
cgcggcatcaacctcggcctgcacacgcggatgtatttccccgacgaagcagacgcaaac
gtcgccgacccgatcctcacgcgcatcgaacatcagacccgtgtcaaaaccctcattgcc
gaggcacagggcgacgggcagtatcactttgacatccgcctccaggggcacaatgaaacc
gtctttttcgacatctga
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