Ruegeria sp. TM1040: TM1040_0653
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Entry
TM1040_0653 CDS
T00359
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
sit
Ruegeria sp. TM1040
Pathway
sit00541
Biosynthesis of various nucleotide sugars
sit01100
Metabolic pathways
sit01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
TM1040_0653
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sit01005
]
TM1040_0653
Enzymes [BR:
sit01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
TM1040_0653
Lipopolysaccharide biosynthesis proteins [BR:
sit01005
]
Lipid A
TM1040_0653
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
ABF63386
RoseoBase:
TM1040_0653
UniProt:
Q1GIY0
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Position
complement(699813..700646)
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AA seq
277 aa
AA seq
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MKKIDINGLTIGNDCPLTVIAGPCQLESADHAQMIAGKLKEACDAAGAQFIFKASYDKAN
RTSLSGKRGLGIDKGLEVLAGVRDTFGVPVLTDVHTEAQCIVAGDVVDVLQIPAFLCRQT
DMLLAAGNTGKAVNIKKGQFLAPWDMDNVVAKVESTGNDKILLTERGTSFGYNALVADMR
GLPRMAQTGYPVVMDATHSVQQPGGQGGSTGGQREFAPVMARAAVSLGIASVFIETHEDP
DNAPSDGPNMIYLKDMPQLIETLMGFDALAKANPIRI
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatcgacatcaatggtctcaccattggcaatgactgtccgctgacggtcatt
gccggtccctgccagctggaaagcgccgaccacgcgcaaatgatcgcgggcaagctcaag
gaggcctgcgacgctgcgggcgcgcaattcatcttcaaggcctcctacgacaaggccaac
cgcacctcactgtcgggcaagcgcggccttggcatcgacaagggcctcgaagtgctcgcg
ggcgtgcgcgacacctttggcgtgccggtactgactgatgttcacaccgaggcgcagtgc
atcgttgcgggggacgtggttgatgtcctgcagatccccgcctttttgtgccgccagact
gacatgttgctggccgccggtaacaccggcaaggccgtgaacatcaaaaagggccagttt
ctcgcaccctgggacatggacaatgttgtggccaaggtcgaaagcaccggcaacgacaag
atcctgctgaccgaacgcggcacctcctttggctacaacgccttggtcgcagatatgcgt
ggtctgccccgcatggcacaaaccggctacccggtggtcatggacgccacccattcggtt
caacagccgggcggtcaggggggctcgacaggtggtcagcgagagttcgctccggtgatg
gcccgcgcagccgtttctttgggcattgcttccgttttcatcgaaacacacgaagatccg
gacaacgcgccctcggacgggccgaatatgatttacctcaaagatatgccgcaattgatt
gagactttgatgggctttgacgcacttgccaaagccaaccccatccgcatctga
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