Ruegeria sp. TM1040: TM1040_0683
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Entry
TM1040_0683 CDS
T00359
Name
(GenBank) UDP-N-acetylmuramate--L-alanine ligase
KO
K01924
UDP-N-acetylmuramate--alanine ligase [EC:
6.3.2.8
]
Organism
sit
Ruegeria sp. TM1040
Pathway
sit00550
Peptidoglycan biosynthesis
sit01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
TM1040_0683
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sit01011
]
TM1040_0683
Enzymes [BR:
sit01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.8 UDP-N-acetylmuramate---L-alanine ligase
TM1040_0683
Peptidoglycan biosynthesis and degradation proteins [BR:
sit01011
]
Precursor biosynthesis
Amino acid ligase
TM1040_0683
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase
Mur_ligase_M
Mur_ligase_C
F420_oxidored
DELLA
3HCDH_N
MurD-like_N
Motif
Other DBs
NCBI-ProteinID:
ABF63416
RoseoBase:
TM1040_0683
UniProt:
Q1GIV0
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Position
731311..732720
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AA seq
469 aa
AA seq
DB search
MTPATKLPGDVGPIHFVGIGGIGMSGIAEVLLNLGYVVQGSDLKSSRITQRLERLGATIF
EGQRAENLEDAEVVVISSAIKPGNAELDEARLRGLPVVRRAEMLAELMRLKSNIAIGGTH
GKTTTTTMMAELMVAGGFDPTVVNGGIIHAYGSNARMGQGEWMVVEADESDGTFNRLPAT
IAVVTNIDPEHMEHWGDFDRLRDGFYEFVSNLPFYGLAVCCTDHAEVQALVGRITDRRVV
TYGFNAQADVRAVNLTYKGGVAHFDILLQAEGQKIEGCTLPMPGDHNVSNALSAVAVCRH
LGMKREEIRTALAAFGGVNRRFTKVGEVDGVTIIDDYGHHPVEIAAVLKAARQAIGTEGE
GRVIAVHQPHRYSRLSNLFDDFCACFNDADVVAIAEVFAAGEDPIEGASRDDLVAGLIRH
GHRHARAILNEDDLLRLVREQTRPGDMVVCLGAGTISAWANGLPERLRG
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgacccctgccaccaaactgcccggcgacgtcggcccgatccattttgtcggtattggc
ggcatcgggatgtctggcatcgccgaggtgcttttgaaccttggctatgtggtgcagggc
tcggatctcaagtcctccaggatcacccagcggctcgaacgccttggcgcaacgattttt
gaaggccagcgcgccgagaacctcgaagatgccgaggtcgtggtgatctcgtccgcgatc
aaacccggcaacgccgaactcgacgaagcccgcttgcgtggcttgccggtggtgcgccgc
gctgaaatgctggccgagctcatgcggctcaagtccaatattgccattggcggcacccac
ggcaaaaccaccaccaccaccatgatggcagagctgatggtggcgggtggctttgatccg
accgttgtgaacggaggcatcattcatgcctatgggtcgaacgcgcggatggggcagggc
gaatggatggtggtggaggccgacgagagtgacggcaccttcaaccgtctgcctgccacg
atcgcggttgtgaccaatatcgaccccgagcacatggagcattggggcgactttgatcgc
ctgcgcgacggattttatgaatttgtctccaaccttccgttctatggtctcgcggtatgc
tgtaccgaccacgccgaagtacaggcgcttgttggccggatcaccgatcgccgcgttgtc
acctacgggttcaacgcgcaggctgacgtgcgcgcggtgaacctcacctacaaaggaggc
gtggcgcatttcgacatcctgctgcaggctgagggtcaaaaaatcgaaggctgtacgctg
ccgatgcctggggatcacaatgtctccaacgcgctctctgcggtggccgtctgtcgtcac
ctcggcatgaagcgcgaagagatccgcacagcccttgccgcctttggtggggtcaatcgt
cgctttaccaaagtgggcgaagtggatggtgtcaccatcattgatgattacggccatcac
ccggtggaaattgccgccgtcctcaaagctgcgcgacaagccatcggcaccgagggcgag
gggcgcgtgatcgccgtccaccagccgcaccgctattcgaggctctccaacctctttgac
gatttctgcgcctgtttcaatgacgccgatgtcgtggccatagccgaggtgtttgccgcc
ggcgaagatcccatcgaaggtgcgagccgcgacgatctggtggcagggttgatccggcat
ggtcatcgccatgcccgcgcgatcctcaacgaagatgacctgctgcgcctcgtgcgtgaa
cagacgcgccccggtgacatggtggtgtgccttggtgcagggacgatttcggcatgggca
aacggattgcccgagaggcttcgggggtga
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