Ruegeria sp. TM1040: TM1040_0716
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Entry
TM1040_0716 CDS
T00359
Name
(GenBank) ABC transporter related
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
sit
Ruegeria sp. TM1040
Pathway
sit02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TM1040_0716
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sit02000
]
TM1040_0716
Transporters [BR:
sit02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
TM1040_0716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA_22
AAA_16
AAA_29
RsgA_GTPase
Mg_chelatase
ATP-synt_ab
PRK
AIG1
Motif
Other DBs
NCBI-ProteinID:
ABF63449
RoseoBase:
TM1040_0716
UniProt:
Q1GIR7
LinkDB
All DBs
Position
771989..773809
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AA seq
606 aa
AA seq
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MLDQPIAQIKGLRVEFETKDGPVVGVENVSFDVTAGETLCIVGESGSGKSVSSLSLMRLV
EYGGGTIAGGELMFNPGDGEAIDLAQAETDLMKQIRGNQIGMIFQEPMTALNPVFTVGRQ
LTEGLRIHKGMDKKQAEARAIEILREVRIPEAERRMKQYPHELSGGMRQRVVIAMAMACE
PRLLIADEPTTALDVTIQAEILALMDRLKRETGTAVMFITHDMAVVAQMADRVVVMFRGN
KVEEGTVHEIFENPQHDYTKALLAAVPKLGEMRGKDYPEPMKLMGVEQAEIKPITGTDEV
LLNVENLVTRFPVKGGLLRRTVAQVHAVEDVSFKVFKGQTLSLVGESGCGKSTCGRSILR
LVEPTSGKVEFEGRDVIGLNQKELHKARLDMQMIFQDPFASLNPQMQLMDQVAEPMKNYN
IASGSEIQDRVASLFDRVHLPRSFMRRFPHEMSGGQRQRIAIARALALNPKLIVADEAVS
ALDVSVQAQVLNLMMELQADLGLSFLFISHDMAVVERVSHQVGVMYLGRLVEIGPRARVF
ENPAHPYTQALMKAVPIADPNQRKSEKDLNFKPIPSPIHDMNYQAEPSQYMEVEPGHFVL
TTDSGY
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgctggaccagcccattgcacagatcaaaggccttcgggtcgaattcgaaaccaaggac
ggccctgtggtcggggttgagaatgtttcgtttgacgtgactgctggtgaaactttgtgc
atcgttggggagtccggatcgggcaaatctgtctcgtccctgtctttgatgcgcctcgtg
gaatacggtggcggcaccatcgcgggcggagaattgatgttcaatcccggcgatggcgag
gcgatcgaccttgctcaggccgagaccgatttgatgaagcagattcgcggaaatcagatc
ggaatgattttccaggaaccgatgaccgcgctcaatccggtcttcacagtgggccgccag
ctcacggaaggcctgcgaatccacaaggggatggacaaaaaacaggcagaggcccgggcc
atcgagattctgcgcgaggtccgcattcccgaggccgagcgccgcatgaagcaatatccg
cacgaactgtctggcgggatgcgccagcgggtagtgatcgcgatggcgatggcgtgcgag
ccgcgtctgctcatcgcggatgaacccacaaccgcgctcgatgtgaccattcaggccgag
atcctcgccctgatggaccgcttgaagcgtgaaaccggcactgcggtcatgtttatcacg
cacgacatggctgtcgtggcgcagatggccgaccgggtggttgtcatgttccgcggcaac
aaggtcgaagagggcaccgtccacgagattttcgagaacccgcagcatgactataccaag
gcattgctggcggcggttcccaagcttggcgagatgcgtggcaaggattaccccgaaccc
atgaagctcatgggcgtcgagcaggccgagatcaagccgatcaccggcaccgatgaggtg
ctgctgaacgtcgaaaacctcgtcacccgtttccctgtcaaaggtgggcttctgcgccgc
accgtggcgcaggtccacgcggttgaggatgtgtccttcaaggtcttcaagggtcagacc
ctgagcctcgtgggcgaatcgggctgcgggaaatcaacctgtggccggtcgatcctgaga
ctggtggaaccgacttcgggcaaggtagagtttgaggggcgcgatgtgatcggcctcaac
cagaaagaactgcacaaggcgcgccttgatatgcagatgattttccaggacccctttgcc
tcactcaatccgcagatgcagctgatggatcaggtcgcggagccgatgaagaactacaat
atcgcctccgggtccgaaattcaggaccgggtcgcatcgctctttgatcgggtccacctg
ccgcgcagcttcatgcgccgcttcccgcacgagatgtccggtggtcagcgccagcggatc
gcgattgcccgtgcgctcgcgctcaacccgaaactgatcgttgcggatgaggccgtctcc
gcgctcgatgtgtcagtgcaggcgcaggtcttgaacctgatgatggaactgcaggccgat
ctgggcctctccttcctgttcatcagtcacgatatggccgtggtcgaacgggtgagccat
caggtcggcgtgatgtatctggggcgtctggtcgaaattggcccgcgtgcgcgtgtgttt
gagaacccggcgcacccctatacgcaggcgctgatgaaggcggttccgattgccgacccc
aaccagcgcaagagcgaaaaggatctgaacttcaaaccgatcccatcgccgatccacgac
atgaactatcaggcagagccctcgcaatacatggaagtggagccggggcactttgtgctg
accaccgattctggctattga
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