Ruegeria sp. TM1040: TM1040_0738
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Entry
TM1040_0738 CDS
T00359
Name
(GenBank) 3-methylcrotonoyl-CoA carboxylase, alpha subunit
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
sit
Ruegeria sp. TM1040
Pathway
sit00280
Valine, leucine and isoleucine degradation
sit01100
Metabolic pathways
Module
sit_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
TM1040_0738
Enzymes [BR:
sit01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
TM1040_0738
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
ATP-grasp
Dala_Dala_lig_C
Biotin_lipoyl_2
ATP-grasp_3
HlyD_3
GARS_A
DUF2118
Cro
LAL_C2
GCV_H
Motif
Other DBs
NCBI-ProteinID:
ABF63471
RoseoBase:
TM1040_0738
UniProt:
Q1GIP5
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All DBs
Position
795827..797764
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AA seq
645 aa
AA seq
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MFNKILIANRGEIACRVMETARRLGVRTVAVYSDADRDAKHVALADEAVHVGHGPAPADS
YLLQDEILAAAKATGAQGIHPGYGFLSENPDFVEKVEAAGLAFIGPSASAIRKMGLKDAA
KALMEEAGVPVVPGYHGDTQDAGFLAKQADSIGYPVLIKAVAGGGGKGMRLVEDPKDFND
ALASAQGEATTSFGNPAVLIEKYIQKPRHIEVQVFGDGTSAVHLFERDCSLQRRHQKVIE
EAPAPGMTDEMRAAMGQAAVRAAEAIGYAGAGTVEFIVDGSEGLRADGFWFMEMNTRLQV
EHPVTELITGVDLVEWQLRVASGEGLPMQQDDLSITGHAFEARLYAEDVPKGFLPATGTL
SHLAFPEGVRADSGVRAGDTISPWYDPMISKVIVHGPSRAAALRQLDDALARTEVAGTVT
NLAFLGALTRHAGFAAGDVDTGLIARDLDSLAAAPEMRAEHKIAAAMVALDVIDPKPEMG
FTLWADLHRSVTLEAQGESFEASVELSGPDRQDWILDGDMFAVNRMGSGWVISGMALPPY
AKSGDAITIFDGYGLSFKVVDPLDRAAGAAGDGNLIEAPMPGLVKAVFAEAGAAVKEGDR
LAILEAMKMEHSLLAARDGVVAEVLAQAGDQVEAGAALVRLEEEA
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagatcctgattgccaaccgcggcgaaattgcatgccgggtgatggaaacc
gcccgtcgtctgggtgtacgcaccgtcgccgtctactccgatgctgaccgagacgccaaa
catgtggcccttgcggatgaggctgtccatgtcggtcatggacctgccccggcggatagc
tacctgctgcaggacgagatcctcgccgccgccaaagccaccggcgcgcaaggcatacac
cctggctatgggtttctgtcggagaatcccgattttgtggaaaaggtcgaggcagccggt
ctcgccttcatcggcccctctgccagtgcgatccgcaagatgggtctcaaggacgccgcc
aaggcactgatggaagaggcgggcgttccggtggttcccggctatcacggcgacacgcag
gatgcgggcttcctcgccaaacaggcggacagcatcggctatccggtcctgatcaaggcg
gttgcaggcggcggtggcaagggcatgcggctggtcgaggaccccaaggatttcaacgat
gcgctcgcctcggcgcagggcgaagccaccacgtcctttggcaatccggcggtgctgatt
gaaaaatacatccagaagccgcgccatatcgaggtacaggtctttggggacggcacatcg
gcggtgcatctgtttgaacgcgactgttcgctgcaacgtcgccaccaaaaggtgatcgaa
gaagccccggccccgggcatgaccgacgagatgcgcgccgccatgggacaggccgccgtg
cgtgccgccgaggcgatcggctatgcgggcgcgggcacggtggagttcattgtggacggc
tcggaagggctgcgtgcggacgggttctggttcatggagatgaacacccgtttgcaggtg
gaacacccggttaccgagctcatcactggcgtcgatctggtggagtggcagctgcgcgtc
gcctctggcgaagggctgcccatgcaacaggacgacctttccattaccggccacgccttt
gaggcgcggctctatgccgaggatgtgcccaagggctttttgcccgccaccggcacgctc
tcgcatctggcctttcccgaaggggtgcgcgccgacagcggtgtgcgggcaggggacacc
atcagcccttggtatgatccgatgatctccaaggtgatcgtgcatggcccctcgcgcgcg
gcagcgctgcgtcagctggatgacgcgctcgcgcggaccgaggttgccggaaccgtaaca
aaccttgccttcctcggtgcgctcacccggcatgcaggctttgctgcgggcgacgtggac
acgggcctgatcgcgcgcgatctcgacagtcttgctgccgcgccggagatgagggccgaa
cacaagatcgcggctgcgatggtggcgcttgatgtgatcgatcccaaacccgaaatgggc
ttcacgctttgggcggacctacaccgttccgttacgcttgaagcgcagggcgagagtttc
gaagcctcggtcgagttgagcggcccggatcgtcaggactggatccttgatggagatatg
tttgccgtcaatcgcatggggtcgggctgggttatcagcggcatggccttgccaccctat
gcaaaaagtggcgacgccatcacgatttttgacggctatgggctgagcttcaaggtcgtt
gacccgctggaccgtgccgcaggcgctgccggggatggcaacctcattgaggccccgatg
ccgggcttggtcaaggcggtctttgccgaggcgggcgccgcagtcaaagaaggcgaccgg
ctcgccatccttgaggccatgaaaatggagcactctttgctagccgcccgtgacggcgtg
gttgcagaagttcttgcgcaagcgggcgatcaggtggaggctggtgcagcgctggtgcgg
ctcgaggaagaggcctga
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