Ruegeria sp. TM1040: TM1040_0835
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Entry
TM1040_0835 CDS
T00359
Name
(GenBank) extracellular solute-binding protein family 1
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
sit
Ruegeria sp. TM1040
Pathway
sit02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
TM1040_0835
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sit02000
]
TM1040_0835
Transporters [BR:
sit02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
TM1040_0835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
ABF63568
RoseoBase:
TM1040_0835
UniProt:
Q1GIE8
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All DBs
Position
complement(879761..880786)
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AA seq
341 aa
AA seq
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MRHLIAATTLATVSATAAMAEGQLNIYNWGNYTSPELIEKFEQEFDIDVTITDYDSNDTA
LAKIKAGGHGFDIVVPSGTYVPIFIGEGLLMKSMPNQMENFKNMDPRWVDVDFDPGRDYT
VPWQWGTVGVTVNTSVYSGDINSAALIFDPPEELKGKINVVPEMLDVMGMAIHYMGGEQC
TADKDMLAKVRDKLVEAKKDWLSMAYGNIEKFAKGDLAAGVNWNGASFRARLQNDDIAFG
YPQTGFSIWMDNAAILADAQNVDNAKLFLNYIMAPENAALLSNFARYANGIKGSEPFMDA
AMAEASEVVIPDELKDAGYLAKTCPPDVQRIYSKIWTEVTK
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgagacatctgattgcagccacaacgcttgcgaccgtctccgcgacggcggccatggcg
gaggggcagttgaatatctacaactggggcaactacaccagcccggaattgatcgagaag
ttcgaacaggagttcgacatcgacgtcaccatcaccgactatgacagcaacgacaccgca
ctggccaagatcaaggcaggtgggcatggctttgacatcgtggtgccgtctggcacctat
gtgccgatcttcatcggcgaaggcctgttgatgaagtcgatgcccaaccagatggagaac
ttcaagaacatggacccgcgctgggtcgatgtggattttgatcctggccgcgactacacc
gtgccttggcaatggggcaccgtgggcgtcaccgtcaatacttcggtttattcaggcgac
atcaactcggcggcactgatctttgatccgccagaagagctgaagggcaagatcaacgtc
gttccagagatgctcgacgtgatgggcatggccattcactacatgggcggagagcaatgc
accgccgacaaggacatgctggccaaagtgcgcgataaactggtcgaggccaaaaaggac
tggctctccatggcctatggcaacatcgagaagttcgccaagggcgacctcgcggctggg
gtcaattggaacggcgcctcattccgggcacgtctgcaaaacgatgacatcgcctttggc
tatccacagaccgggttttcgatctggatggacaacgccgcgatcctcgcggatgcgcag
aatgtcgacaatgccaaactgttcctgaactatatcatggctccggagaacgcagcgctt
ctgtccaattttgcccgctacgccaatggcatcaaaggatctgaaccctttatggatgcg
gccatggcagaggcctccgaggtggttattcccgacgagctcaaagatgccggctatctc
gccaagacctgcccacccgacgtgcagcggatctattccaagatctggaccgaagtgacc
aaataa
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