KEGG   Ruegeria sp. TM1040: TM1040_0838
Entry
TM1040_0838       CDS       T00359                                 
Name
(GenBank) spermidine/putrescine ABC transporter ATP-binding subunit
  KO
K11072  spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
Organism
sit  Ruegeria sp. TM1040
Pathway
sit02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:sit00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    TM1040_0838
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:sit02000]
    TM1040_0838
Enzymes [BR:sit01000]
 7. Translocases
  7.6  Catalysing the translocation of other compounds
   7.6.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.6.2.11  ABC-type polyamine transporter
     TM1040_0838
Transporters [BR:sit02000]
 ABC transporters, prokaryotic type
  Mineral and organic ion transporters
   Spermidine/putrescine transporter
    TM1040_0838
SSDB
Motif
Pfam: ABC_tran TOBE_2 AAA_21 AAA_22 SMC_N AAA nSTAND1 ABC_ATPase nSTAND3 ORC-CDC6-like Rad17 AAA_25 AAA_16 AAA_5 AAA_29 NACHT OB_MalK RsgA_GTPase AAA_28 ATPase_2 Mg_chelatase AAA_15 AAA_30 AAA_14 AAA_23 AAA_19 NB-ARC TsaE NPHP3_N
Other DBs
NCBI-ProteinID: ABF63571
RoseoBase: TM1040_0838
UniProt: Q1GIE5
LinkDB
Position
complement(882584..883696)
AA seq 370 aa
MTSLRPTRDVCMIKIDGLTKIFGEGAEAFTALDDVSLTIQSNEFFTLLGPSGCGKTTLLR
MIAGFLDPTRGQLMLDGKDLLRHPPHQRPVNTVFQSYALFPHMTVSENIAFGLQMLKRPK
AEIAATVSEMLELVQMTAMADRKTAQISGGQQQRVALARALAPRPKVLLLDEPLSALDFK
LRKEMQLELKRLQHETGITFVFVTHDQEEALTMSDRIAVMNAGTIRQIGGPRDIYDHPAE
RFVADFIGDTNFLKAQMVSSTESGALVRLASGEEILAKAPEGGAHSAGQAVTLAVRPEHA
RLCERTDALLIGTLDNVVYFGTDTHYHVTMEGGGTFILRRQNQPGQTQTLAINDTVGVCF
APDTAQILKD
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgacgtccttgcggccaacaagagacgtttgcatgatcaaaattgatggcctaaccaag
atatttggcgaaggcgcagaggctttcaccgcattggatgatgtttctctcaccattcaa
tccaatgaattttttacgctccttggtccttccggctgcggaaaaacaacgctgttgcgc
atgattgccgggtttctggatcccactcgtggtcaattgatgctcgacggcaaagacctt
ttgcgacaccccccgcatcagcgcccagtcaatacggtgtttcaatcctatgcgctgttt
ccgcatatgaccgtttcagagaatatcgcctttggacttcagatgcttaagcgaccgaag
gcggaaattgccgcaaccgtctcggagatgctggagctggtgcagatgacggcgatggcc
gaccggaaaaccgcgcagatttccggtggtcagcaacagcgcgtggcgctggcccgtgcc
ctcgcgccgcgccccaaggtcctgttgctggacgagcctctctccgcactcgacttcaaa
ctgcgcaaggaaatgcagctcgaactcaaacggcttcagcatgaaaccggcatcactttt
gtctttgtcacccatgaccaggaagaagcgctgacgatgtcggaccgcatcgcggtgatg
aatgcgggcaccatccggcagatcggcgggccgcgggacatctacgatcatccggccgag
cggttcgtggccgacttcatcggcgacaccaattttctgaaagcccagatggtatcttcc
accgaaagcggggccttggtccggctcgcatcgggtgaggaaatcctggccaaggctccg
gaagggggcgcccattccgcaggacaggcggtgacattggcggtgcgccctgaacatgcg
aggctttgcgaacgtacagacgcgctgttgatcggaaccttggacaacgtggtctatttc
ggcaccgacacccactatcacgtcacaatggaagggggcggcacttttatcctgcggcgg
caaaaccagccgggacaaacgcagaccttggcgatcaatgacacggtgggggtgtgcttt
gcgcctgacaccgcgcagatcctgaaggattga

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