Ruegeria sp. TM1040: TM1040_0971
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Entry
TM1040_0971 CDS
T00359
Name
(GenBank) sarcosine oxidase alpha subunit family
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
sit
Ruegeria sp. TM1040
Pathway
sit00260
Glycine, serine and threonine metabolism
sit01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
TM1040_0971
Enzymes [BR:
sit01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
TM1040_0971
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
TM1040_0971
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
FAD_binding_2
AlaDh_PNT_C
NAD_binding_8
Pyr_redox_3
HI0933_like
Thi4
GIDA
DAO
Pyr_redox
FAD_binding_3
Lycopene_cycl
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
ABF63704
RoseoBase:
TM1040_0971
UniProt:
Q1GI12
LinkDB
All DBs
Position
1037740..1040775
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AA seq
1011 aa
AA seq
DB search
MSTRLAKQGRLIDRSKQIEFSFNGKTLKGFAGDTLASALLANDQMLVGRSFKYHRPRGLV
ASGSEEPNALVGLGVGDRFEPNQRATTTELFSGLKAQSQNHWPSLEFDVGEINSKLFSRF
LTAGFYYKMFIHPRPFWKHVYEPFIRQSAGLGKAPNKELKDADTYEHFYYFCDVLVIGGG
VAGLQAAKTAAATGAKVLVLEEKSYWGGRTPVDGGTIEGQSAEAWISKTVAELEAMDNVT
LRTRTMGAGVYDHGYILGYERLTDHAPGQGGPRHRLWRIRATQTVTATGAIERPLSFAGN
DVPGVMLAASMRDYVVNWGVTPGQKVVVATNNDDAYRTAITLHEAGVEVVRVLDTRESGG
GDLADKVRALGIRVECGRAIAKVKDGKRVTKVAICAQNGEGGAHEEIEADAVAMSGGWSP
VVHLWSHCGGKLIWDEAQAHFRPDPDRAPTGHDGLPFVVTAGASSGPLTLSGVMADAAEA
GARAAEAAGRPAQKVSPVATSDLAEAPMEAVWMMPAKADIKLRMKTWLDYQNDVKVSDVQ
LAAREGYESVEHTKRYTTLGMATDQGKLSNINGLAVLADSLGAEIPQVGTTTFRPPYHPI
SMGAIGGEARGEIFQPLRKTPMYDWHDSNGAHWEPVGHWRRPYAYVRSGESVHQAVNREV
KNTRENLGLLDASTLGKLIVKGPDAGKFLDMLYTNMMSTLKIGKCRYGLMCSENGFLVDD
GVVARIDEDTWLCHTTTGGADRIHAHMEEWLQTEWWDWKVYVTNATEQLAQVAVVGPNAR
KVLEKLNEKAGGGMDLSKEALAFMEWKDGEIGGFKARAYRISFSGELSYEIAVSASEGQA
FWNALIEAGKEFGVMPYGTECLHILRAEKGFIMIGDETDGTVIPQDLGLHWALSKKKEDY
LGKRAQQRSHMADPDRWQLVGLETVDGSVLPDGAYAVGDGNNANGQRNTIGRVTSTYYSA
NLDRGIAMGLVKHGPKRMGEVIDFPGLDGKIYKAKIVDPIFYDKEGDKQNV
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgcgtctcgccaaacagggtcgtctcatcgaccgctccaagcagatcgagttt
tccttcaacggcaaaaccctcaaggggtttgctggcgatactctggcctctgcgcttctc
gccaacgatcagatgctggtcgggcggtccttcaagtaccaccgcccgcgtggcctcgtg
gcctccggatctgaggagccgaacgcgctggtgggcctcggtgtcggcgaccgcttcgag
ccgaaccagcgcgccactaccaccgagcttttctcgggcctcaaggcgcaatcgcagaac
cactggccgagcctcgagttcgacgtgggcgagatcaactccaaactgttctcgcgcttc
ctgactgcgggcttctactataagatgttcatccacccgcgtcccttctggaagcatgtg
tatgagccctttattcgccagtccgcagggctcggcaaagcccccaacaaggaactgaag
gacgccgacacctacgagcatttctattatttctgtgacgtgctggtgattggcggcggt
gtggctggccttcaggctgcaaagaccgccgcggcgaccggcgccaaggttctggtgctc
gaggaaaaatcctattggggtggtcggacgcccgtcgacggcggtaccatcgaaggccaa
tccgccgaagcctggatcagcaagaccgtggccgagcttgaggcaatggacaatgtcacc
ctgcgcacccgcaccatgggggcaggcgtttacgatcatggctatatccttggttatgaa
cgcctcaccgaccacgcgccggggcagggcggtccgcgccatcgcctctggcgtatccgt
gcgacgcaaaccgtcaccgcaaccggtgccatcgaacgcccgctgtcctttgcgggcaac
gacgtgccgggtgtgatgctggccgcttccatgcgcgactatgtggtgaactggggggtg
actccggggcagaaggttgtggtcgccaccaacaatgatgatgcttaccgcaccgcaatc
accctgcatgaggcaggcgtcgaggtcgtgcgcgttctggacacgcgcgagagcggcggc
ggcgatctcgctgacaaggtccgcgcgcttggtatccgcgtcgaatgcggccgtgccatc
gccaaggtgaaggacggcaaacgcgtcaccaaggtcgccatctgcgcccagaacggcgag
ggcggcgcccatgaggagatcgaagccgatgctgtggcgatgtccggtggctggtcgccc
gtggttcacctctggtcccactgcggcggcaagctcatctgggacgaggcgcaggcgcat
ttccgccccgacccggatcgcgcgcccactggccatgatggtctgccctttgtggtgacg
gctggcgcatcctctggtccgctcacgctctctggcgtgatggccgatgcggccgaagct
ggcgcgcgtgctgccgaggccgccggccgtcctgcgcaaaaagtgtcgccggttgccacc
tcggatctcgctgaagcgcctatggaagccgtttggatgatgcccgccaaggccgacatc
aaactgcgcatgaaaacctggctcgactatcaaaacgacgtcaaggtgtccgacgtgcag
cttgcggcgcgcgagggctatgaaagcgtcgagcacaccaaacgctacaccacgctgggc
atggcgacggatcaggggaaactctccaacatcaacggtctggctgtgctggccgatagt
ctgggcgccgagatcccgcaggtcgggaccaccacgttccgcccgccgtatcacccgatt
tccatgggagcgattggcggtgaggcgcgtggcgagatcttccaacccctgcgcaagacg
ccgatgtatgactggcacgacagcaacggcgcccattgggagccggtgggccactggcgg
cgtccctacgcctatgtgcgctcgggcgagagcgtccatcaggcggtcaatcgcgaggtg
aaaaacacccgcgagaaccttggccttctggatgcctccaccctcggcaaactcatcgtc
aaagggccggatgcgggcaagttcctcgacatgctctacaccaatatgatgagcacgctg
aagatcggcaaatgccgctatggcctgatgtgttccgagaacggctttcttgtggatgac
ggcgtggttgcgcgcatcgacgaggacacctggctctgccacaccaccaccggcggcgcg
gatcgcattcacgcccacatggaagaatggctgcagaccgaatggtgggactggaaggtc
tatgtcaccaacgccaccgagcaactggcgcaggtcgccgtcgttggccccaacgcccgc
aaggtgctggaaaagctgaatgaaaaagcaggcggcggtatggatctctcgaaagaggcg
ctcgcgttcatggagtggaaagacggcgagatcggcggcttcaaggcgcgcgcttaccgg
atttccttctcgggcgagctctcttatgagatcgcagtttctgcgtccgaggggcaggcc
ttctggaatgcgctcatcgaggcgggcaaggaatttggcgtcatgccctatggcaccgaa
tgtctgcatatcctgcgggccgaaaaaggcttcatcatgattggtgacgagaccgacggc
accgtgatcccgcaggatcttggtctgcactgggcgctctccaagaagaaagaagactat
cttggcaagcgcgcgcagcagcgcagccacatggccgatcccgaccgctggcaactggtg
ggtctggaaaccgtagatggctctgtgttgcccgatggcgcctatgcggttggcgatgga
aacaacgccaatggccagcgcaataccatcggccgcgtgacgtcgacctactactccgcc
aaccttgatcgcggcatcgcgatggggctggtgaaacatggccccaaacgcatgggcgag
gtgatcgacttccccggccttgatgggaaaatctacaaagccaagatcgtcgacccgatc
ttctatgacaaagaaggggacaagcagaatgtctaa
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