Ruegeria sp. TM1040: TM1040_0980
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Entry
TM1040_0980 CDS
T00359
Name
(GenBank) ABC transporter related
KO
K24821
ATP-binding cassette, subfamily B, heavy metal transporter
Organism
sit
Ruegeria sp. TM1040
Pathway
sit02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
TM1040_0980
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sit02000
]
TM1040_0980
Transporters [BR:
sit02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
TM1040_0980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
ABC_ATPase
AAA_16
DUF87
AAA_22
AAA_29
AAA_18
AAA_10
Rop-like
DUF7709
nSTAND3
ABA_GPCR
Motif
Other DBs
NCBI-ProteinID:
ABF63713
RoseoBase:
TM1040_0980
UniProt:
Q1GI03
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Position
1047285..1049105
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AA seq
606 aa
AA seq
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MPPMDDPTAAEERRSGLRTLRKVWPYVWPEQGRAVKIRVLLALLVLVAAKGIAVVTPIFY
KGAVDALAGEGVPVLALGAIGLTVAYGMARVMNTGFQQLRDVIFAPVTQRALRRLAITTF
RHIHAMSMRYHITRKTGGLSRIIERGVKGVEFLLRFLVLSIGPLLLELTLVAVVLAWWFD
IWYLVAVAVTVALYVWFTFAVTEWRVKLRREMNRQDTDANQKAIDSLLNYETVKYFGAED
REAARYDVAMKGYAEAALKTAYSLGALNFGQAVIITTGLVSVMVMAAMGVERGAMTVGDF
VMVNAYMIQITGPLGFLGTVYREIRQSLVDMGEMFDLLDQPPDVQDATDARALQVSGGQI
QLENVRFGYDPEREILKGVSLTVEAGQTVAIVGSTGSGKSTIGRLLFRFYDVSAGRLLID
GQDVREVTQKSLHAAIGVVPQDTVLFNDTIRYNIAYGRDGATEADIVEAARAAQIHDFIE
GLPQGYDTPVGERGLKLSGGEKQRVGIARSLLKNPPILLLDEATSALDTDTEQEIKGALA
RAGQGRTVITIAHRLSTIAEADRIVVLEQGEVVETGTHEALLAEGGRYAQLWQRQQADRD
MASGAA
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgcccccgatggacgatccaaccgccgccgaagaacgtcgctccgggctgcgcacgctg
cgcaaggtgtggccctatgtctggccagagcaggggcgtgcggtgaagatccgcgtgctg
ctagcgcttctggtgctggttgcggccaagggcatcgcggtggtgacgccaatcttttac
aagggtgcggtggatgcgctggcgggcgagggcgtgccggtgctggcgcttggggccatt
ggtctcacggtggcctatggcatggcgcgggtgatgaacaccggctttcagcagcttcgg
gatgtgatctttgcgcccgtcacgcagcgggcactgcggcggctggcgatcaccaccttt
cgccacatccacgcgatgtccatgcgctaccatatcacccgcaagaccggcgggctcagc
cggattattgagcgtggcgtcaaaggggtagagttccttttgcgctttctggtgctctcc
atcgggccgctgctcttggagctgacgctggtcgctgtggtgctcgcatggtggtttgac
atctggtatctcgttgccgttgcggtgaccgtggcgctctatgtctggttcacctttgct
gtgaccgaatggcgggtgaagctgcgccgcgagatgaaccgccaggataccgacgccaat
caaaaggcgatcgacagtctcttgaactatgagacggtcaagtatttcggcgccgaggac
cgcgaggcggcccgctacgatgtcgcgatgaaaggctacgccgaggcggcccttaaaacc
gcctattcgctgggcgctcttaatttcggccaggctgtgattattaccacggggcttgtg
agcgtgatggtgatggcggcgatgggggtggaacgcggcgcgatgacggttggcgatttc
gtcatggtcaacgcctatatgatccagatcaccgggccgttgggcttcttggggactgtc
taccgcgagatccgccaaagccttgtggatatgggcgagatgtttgatctgctcgatcag
ccgccggatgtgcaagatgcaaccgacgcccgtgcgctgcaggtgagcggcggccaaatc
cagctggaaaacgtgcgctttggctatgaccctgagcgcgagattctaaaaggcgtctcc
ctcactgtggaggccgggcagacggttgccatcgtgggttcgacgggctcgggaaaatcc
accatcgggcggctcttgttccggttttacgatgtgagcgccgggcggttgctgatcgac
ggtcaggatgtgcgcgaggttacgcaaaagagcctgcatgccgccatcggcgtcgtaccg
caggacaccgtgctatttaacgataccatccgctacaacattgcgtatggccgcgatggg
gcgaccgaggctgatatcgtggaggccgcgcgcgcggcccagattcatgatttcatcgaa
ggccttccacagggctatgacaccccggtcggggaacgcggcctgaagctctcgggcggt
gaaaaacagcgcgtcgggattgcccgaagcctgctgaagaacccgccaatcctcttgctg
gacgaggcgacctcggcccttgataccgacaccgagcaagagatcaaaggcgcattggcg
cgcgcggggcagggccgtaccgtgatcaccatcgcgcaccgcctgtctaccatcgctgag
gcagatcgcattgtcgttcttgagcagggggaggtggtggaaactggcacccacgaggct
ctgctggcagagggtggccgctatgcgcagctctggcagcgtcagcaggcggatcgggac
atggcctcgggcgcggcctga
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