Ruegeria sp. TM1040: TM1040_0990
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Entry
TM1040_0990 CDS
T00359
Name
(GenBank) Pyrrolo-quinoline quinone
KO
K17713
outer membrane protein assembly factor BamB
Organism
sit
Ruegeria sp. TM1040
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sit02000
]
TM1040_0990
Transporters [BR:
sit02000
]
Other transporters
Pores ion channels [TC:
1
]
TM1040_0990
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PQQ_2
PQQ
Beta-prop_ACSF4
Beta-prop_EMC1_N
Glu_cyclase_2
Motif
Other DBs
NCBI-ProteinID:
ABF63723
RoseoBase:
TM1040_0990
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All DBs
Position
1061024..1062349
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AA seq
441 aa
AA seq
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MMAIPGGFGLRAGVMATAMAALLMGCAEPEEILRGPREDIRAEARGGEFENRSVAISLPR
VVTNTAWQQSPGQPTTRTAHAALSAAPALVWSTNIGAGDSRKQRITAAPVVGGGRIYTLD
AASTVSAVSPAGAVLWQHTIEPASDDADDATGGGIAYADGVLYVSSGFGVLSALDAKTGA
PVWRQELDATGSGSPTIRDGLLYLVAGDDTAWVIDTKDGRIAWQLEATPSASNILGAPAP
VVGSEISIFAFGSGDLIGTFRRGGFRRWIASVSGARTGSAISQIGDVTGAPFMDGNRVYV
GNQSGRTAAFDVASGDRLWTAFEGTFGPVWATGGSLFFVSDRSQLMRLSANDGSPIWSVD
LPGYLKDKPRKRAEIVAHHGPILAGGQLVVASNDGLLRFFDPVDGRQTRTVEIKGGATTE
PVVANGTLYVVTRDGQLAAFR
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgatggcaattccaggtggctttggcctgcgcgcgggcgtgatggcgacggcgatggcg
gctctcttgatgggctgcgcagagccggaggagatcctgcgcggcccccgcgaagacatc
cgcgccgaagcccggggcggagagttcgaaaaccgctcggtcgccatctcattgccccgc
gtcgtgaccaacaccgcgtggcagcaaagtccgggtcagccgaccacgcgcaccgcccat
gcggcgctctcggcggcaccggcgctggtctggtccaccaatattggcgcaggagacagc
cgcaaacagcgcatcaccgcagctcccgtggtgggcggaggccggatctatacgctcgat
gcggcctcgaccgtatctgcggtatcgcccgctggcgccgtcttgtggcagcacaccatc
gagccggccagtgatgatgcggacgatgccacgggaggcggcatcgcttacgcggatggc
gtgctttatgtgtcgtcgggctttggcgtcctgagcgcgcttgatgcaaaaaccggcgcg
ccggtgtggcgacaggaactggacgcaaccggctctggcagccccacgattcgcgatggg
cttctgtatctggtggccggggatgacaccgcctgggtgattgacacgaaggatgggcgt
atcgcctggcaactggaagcgacgccaagcgcgtccaacatcctgggcgctccggcgcct
gtggtgggctccgagatctcgatctttgcctttggctcgggggatctgatcggcacgttc
cgtcgcggagggttccgccgctggatcgcatctgtgtctggtgcgcgcaccgggagcgcg
atttcgcagatcggagatgtgaccggcgcccccttcatggatggcaatcgcgtctatgtc
ggcaaccagtcggggcgtaccgcggcctttgatgtggcctcgggcgatcgcctctggacc
gcgtttgaaggcacgttcggcccggtctgggcgacgggcggtagcctgttctttgtcagt
gaccgcagccagctgatgcgcctcagtgccaatgatggcagtccgatctggtctgtggat
ctgccgggctacctgaaagacaagccccgcaaacgtgcagagatcgtagcgcatcacggc
cccattctcgctggcggtcaactggtggtggcctccaatgatgggcttttgcgcttcttt
gatccggtcgatggacggcagacccgcaccgtcgagatcaagggcggtgccacgacggag
cccgtcgtggccaatggcacgctttatgtggtgacgcgtgatggccaactggcggccttt
cgctaa
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